DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpina3m

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_033279.2 Gene:Serpina3m / 20717 MGIID:98378 Length:418 Species:Mus musculus


Alignment Length:384 Identity:105/384 - (27%)
Similarity:180/384 - (46%) Gaps:30/384 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL--NLPE-D 69
            |...|:...|...||:.....|...||:.|||.:...::::.:||.|||..|:...|  ||.| .
Mouse    45 LTLASINTDFAFSLYKKMALKNPDKNIVFSPLSISAALALVSLGAKGNTLEEILEGLKFNLTETS 109

  Fly    70 KKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKA 134
            :.::...:..||.:|.:.:....:::.|.:|:.:.:.:...:::.....::.||.........:|
Mouse   110 EADIHQGFGHLLQRLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRALYQTEAFTADFQQPTEA 174

  Fly   135 AWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQV 199
            ...|||:|.:||...:|.:|  |:|......|::|..:|||.||..||..:|....||:.:...|
Mouse   175 TKLINDYVSNQTQGMIKKLI--SELDDRTLMVLVNYIYFKGKWKISFDPQDTFESEFYLDEKRSV 237

  Fly   200 NVNMMSQVGRFKMRTSTI----DQ-----IIELPFAYSNLSMVIVLPKDNGSLTQAEA-----TI 250
            .|.||      ||:..|.    |:     ::||.:. .|.|.:.:|| |.|.:.|.||     |:
Mouse   238 KVPMM------KMKFLTTRHFRDEELSCSVLELKYT-GNASALFILP-DQGRMQQVEASLQPETL 294

  Fly   251 ESYPQIVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKA 315
            ..:.:.:.|.....:.||||.|.....|.:.|..:||:::|:..:|:|.:.......:|||||||
Mouse   295 RKWWKSLKTRKIGELYLPKFSISTDYNLKDILPELGIKEIFSKQADLSGITGTKDLSVSQVVHKA 359

  Fly   316 FIEIDEEGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDD--DNIYFRGRVVDP 372
            .:::.|.|..|.:|:.. |.|........:|...|.||:.:|...  ....|..:|.:|
Mouse   360 VLDVAETGTEAAAATGF-IFGFRSRRLQTMTVQFNRPFLMVISHTGVQTTLFMAKVTNP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 101/371 (27%)
Serpina3mNP_033279.2 SERPIN 56..417 CDD:214513 101/371 (27%)
RCL 367..392 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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