DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and Serpina3n

DIOPT Version :10

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_033278.2 Gene:Serpina3n / 20716 MGIID:105045 Length:418 Species:Mus musculus


Alignment Length:386 Identity:109/386 - (28%)
Similarity:180/386 - (46%) Gaps:34/386 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL--NLPE-D 69
            |...|:...|...||:..:..|...||:.|||.:...::::.:||.|||..|:...|  ||.| .
Mouse    45 LTLASINTDFAFSLYKELVLKNPDKNIVFSPLSISAALAVMSLGAKGNTLEEILEGLKFNLTETS 109

  Fly    70 KKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKA 134
            :.::...:..||.:|.:.|....:...:.||:.:...:...:.:.....::|||.........:|
Mouse   110 EADIHQGFGHLLQRLNQPKDQVQISTGSALFIEKRQQILTEFQEKARALYQAEAFTADFQQPRQA 174

  Fly   135 AWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQV 199
            ...|||:|..||...:|:::  |||......|::|..:||..||..||.::|....||..|...|
Mouse   175 KKLINDYVRKQTQGMIKELV--SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPV 237

  Fly   200 NVNMMSQVGRFKMRTSTI----DQ-----IIELPFAYSNLSMVIVLPKDNGSLTQAEA-----TI 250
            .|.|||      |...|.    |:     ::||.:. .|.|.:.:|| |.|.:.|.||     |:
Mouse   238 IVPMMS------MEDLTTPYFRDEELFCTVVELKYT-GNASAMFILP-DQGKMQQVEASLQPETL 294

  Fly   251 ESYPQIVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKA 315
            ..:...:...|...:.||||.|.....|.:.|..:||:::|::.:|:|.:......|:|||||||
Mouse   295 RKWKNSLKPRMIDELHLPKFSISTDYSLEDVLSKLGIREVFSTQADLSAITGTKDLRVSQVVHKA 359

  Fly   316 FIEIDEEGGSAGSASASPIRGLSDYATSVVTFTV--NSPFVFMIRDDDN--IYFRGRVVDP 372
            .:::.|.|..|.:|:......:|   ..:...||  |.||:.||.|.:.  ..|..::.:|
Mouse   360 VLDVAETGTEAAAATGVKFVPMS---AKLYPLTVYFNRPFLIMIFDTETEIAPFIAKIANP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 107/380 (28%)
Serpina3nNP_033278.2 serpinA3_A1AC 37..418 CDD:381019 109/386 (28%)
RCL 367..392 6/27 (22%)

Return to query results.
Submit another query.