DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpina1b

DIOPT Version :10

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_033270.3 Gene:Serpina1b / 20701 MGIID:891970 Length:413 Species:Mus musculus


Alignment Length:374 Identity:106/374 - (28%)
Similarity:182/374 - (48%) Gaps:20/374 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL--NLPE-DKKNVAT 75
            ||.|...|||..:..:...||..||:.:....:|:.:|:.|:|..::...|  ||.: .:.::..
Mouse    48 LGDFAISLYRELVHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHK 112

  Fly    76 IYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAIND 140
            .:..||..|.|......|...|.||||..:.:.:::.:....|::||..::..|:..:|...|||
Mouse   113 SFQHLLQTLNRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNFAESEEAKKVIND 177

  Fly   141 WVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMS 205
            :|...|...:.:.:  .:|..|....:.|...|||.||..||..||:...|:|.||..|.|.||.
Mouse   178 FVEKGTQGKIVEAV--KELDQDTVFALANYILFKGKWKKPFDPENTEEAEFHVDKSTTVKVPMMM 240

  Fly   206 QVGRFKMRTSTI--DQIIELPFAYSNLSMVIVLPKDNGSLTQAEATI--ESYPQIVLTEMD--VH 264
            ..|...:...:|  ..::.:.:| .|.|.|.:||:| |.:...|.|:  |...:|:|....  |.
Mouse   241 LSGMLDVHHCSILSSWVLLMDYA-GNASAVFLLPED-GKMQHLEQTLNKELISKILLNRRRRLVQ 303

  Fly   265 VQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSG-TRISQVVHKAFIEIDEEGGSAGS 328
            :.:|:..|.....|...:..:||..:||:.:|:|.:..::. .::|:.||||.:.|||.|..|  
Mouse   304 IHIPRLSISGDYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSKAVHKAVLTIDETGTEA-- 366

  Fly   329 ASASPIRGLSDYATSVVTFTVNSPFVFMIRDD--DNIYFRGRVVDPLKK 375
            |:|:....:......::.|  :.||:|:|.::  .:..|.|:||||..|
Mouse   367 AAATVFEAVPMSMPPILRF--DHPFLFIIFEEHTQSPIFVGKVVDPTHK 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 103/369 (28%)
Serpina1bNP_033270.3 serpinA1_A1AT 44..412 CDD:381012 105/371 (28%)
RCL 368..387 2/20 (10%)

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