DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and srp-8

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:356 Identity:87/356 - (24%)
Similarity:163/356 - (45%) Gaps:28/356 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKLLTKLERGKKVA 91
            ||:.| :.:.||:.:.:.:..:...|.|.|.:::...|........:.|.:..:.|.|...||..
 Worm    26 QDHSQ-SFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDGEMVTHFSNVSTALSAMKKDP 89

  Fly    92 ILHLANRLFV-----NETIGVNK---RYNKLVNKH-FRAEAEAIKLADRLKAAWAINDWVLDQTL 147
            .:.:.|.:..     .|::.::|   .||..|:.| ...|.|.||         .||..:.:.|.
 Worm    90 QVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIK---------TINKLIRENTD 145

  Fly   148 DNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQVG-RFK 211
            .::|.|.....:..|:..|.::||.|:..|:.:|.|::|..|.|:.:.:...|:..:...| ..|
 Worm   146 GHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHRNIKFLHATGANRK 210

  Fly   212 MRTSTIDQIIELPFAYSNLSMVIVLPKDNGSLTQA-----EATIESYPQIVLTEMDVHVQLPKFK 271
            ...:...|::.||:..|:..|.|.|||:...|.:|     .:||:.....|...: |:||:|.::
 Worm   211 YCENDKFQVLSLPYTDSSFEMTIFLPKEQFGLAEALKTLGTSTIQELKSNVSNYL-VNVQIPIWR 274

  Fly   272 IDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDEEGGSAGSASASPIRG 336
            .:..::|..||:::||..:.|.|:.|...  .....||:.:|||.||::|.|.|..:.:....:.
 Worm   275 NETEIDLNSTLQAIGITKILNESAYIGNF--AENVHISEFIHKAIIEVNENGTSPATNTKVITKR 337

  Fly   337 LSDYATSVVTFTVNSPFVFMIRDDDNIYFRG 367
            ..:....:..|..:.||::.|...::|.|.|
 Worm   338 WREETGEIRDFIADHPFLYTIHYKNSILFMG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 87/356 (24%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 87/356 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.930

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