DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and Serpina12

DIOPT Version :10

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_620180.2 Gene:Serpina12 / 191570 RGDID:708485 Length:414 Species:Rattus norvegicus


Alignment Length:376 Identity:94/376 - (25%)
Similarity:183/376 - (48%) Gaps:31/376 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPE-DKKNVATIYDK 79
            :|..:|.:....:::|.||..|||.:....||:.:||..:|..|:|...|..| ..:::...:..
  Rat    54 EFGFKLLQRLASNSRQGNIFLSPLSISTAFSMLSLGAQNSTLEEIREGFNFKEMSDRDMHMGFHY 118

  Fly    80 LLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDWVLD 144
            ||.||.|..:...:.:.|.||:::.:...:|:.||....:.|:.......|.......||.::..
  Rat   119 LLQKLNRETQDVKMSIGNALFMDQRLRPQQRFLKLAKNLYDADMILTNFQDLENTQKNINKYISR 183

  Fly   145 QTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQVGR 209
            :|.:.:::::  .::.|....::.|..:|:|.|:..||...||.:.|::.:...|.|.||.|.|.
  Rat   184 KTHNRIENMV--KNIDPGTVMLLTNYIYFQGRWQYEFDPKQTKEEDFFIEEGKTVKVPMMFQRGM 246

  Fly   210 FKMR--TSTIDQIIELPFAYSNLSMVIVLPKDNGSLTQAE----ATIESYPQIVLTEMDVHVQLP 268
            :.|.  :.....|:|:|:. .|::...||| |:|.|...|    |.|.:..:.:|::..|.|.:|
  Rat   247 YDMAYDSQLSCTILEMPYR-RNITATFVLP-DSGKLRLLEQGLQADIFAKWKSLLSKRVVDVWVP 309

  Fly   269 KFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDEEG--GSAGSAS- 330
            :..|.....:.:.|..:||..:|....|::.:.:....::.:.||||.:.::|:|  |:|||.: 
  Rat   310 RLHISATYNMKKVLSRLGISKIFEEHGDLTRISSHRSLKVGEAVHKAELRMNEKGTEGAAGSGAQ 374

  Fly   331 ----ASPIRGLSDYATSVVTFTVNSPFVFMIRDD--DNIYFRGRVVDPLKK 375
                .:|.|           ..:|:||:.||.::  .::.|..|:.:|.:|
  Rat   375 TLPMETPRR-----------MKLNAPFLMMIYENLMPSMIFLARIYNPSEK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 92/371 (25%)
Serpina12NP_620180.2 serpinA12_vaspin 40..411 CDD:381026 92/371 (25%)
Reactive center loop. /evidence=ECO:0000250|UniProtKB:Q8IW75 364..382 5/17 (29%)

Return to query results.
Submit another query.