DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and Serpinb2

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001167641.1 Gene:Serpinb2 / 18788 MGIID:97609 Length:415 Species:Mus musculus


Alignment Length:416 Identity:111/416 - (26%)
Similarity:187/416 - (44%) Gaps:71/416 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNL------------PED 69
            |...|.:...:.|...||..||..:...::::|:||.|||..::...|..            ||:
Mouse    11 FALNLLKQIEKSNSTQNIFISPWSISSTLAIVLLGAGGNTEQQMAKVLQFNEIGSYGITTRNPEN 75

  Fly    70 -----------KKNVATIYDKLLTKLERGKKV-----------------AILHLANRLFVNETIG 106
                       |:|    |...:.:.:.|.|:                 .:|..||:||..::..
Mouse    76 FSGCDFAQQIQKEN----YPSAILQAQAGDKIHSAFSSLSSTINTPQGDYLLESANKLFGEKSAR 136

  Fly   107 VNKRYNKLVNKHFRAEAEAIKLAD-RLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINA 170
            ..:.|.:|..|::..|.||:...: ..:|...||.||..||...:.:::....:..|...|::||
Mouse   137 FKEEYIQLSKKYYSTEPEAVDFLECAEEAREKINSWVKTQTKGEIPNLLPEGSVDEDTKMVLVNA 201

  Fly   171 AFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMM-----SQVGRFK-MRTSTIDQIIELPFAYSN 229
            .:|||.|||.|:|.......|.|:....:.|.||     ..:|..| ::|    ||:|||.. .|
Mouse   202 VYFKGKWKTPFEKKLNGLYPFRVNSHESIPVQMMFLHAKLNIGYIKDLKT----QILELPHT-GN 261

  Fly   230 LSMVIVLPKD-----NG-SLTQAEATIESYPQIV----LTEMDVHVQLPKFKIDFRMELVETLKS 284
            :||:::||.:     .| .|.::|....::.:.:    |.|.||.|.:||||:....||...|:|
Mouse   262 ISMLLLLPDEIEDASTGLELLESEINFANFNKWISKDTLDEDDVVVYIPKFKLAQSYELKSILQS 326

  Fly   285 MGIQDLFN-SSSDISVLLNQSGTRISQVVHKAFIEIDEEGGSAGSASASPIRGLSDYATSVVTFT 348
            ||::|.|| ..::.|.:..::...:|:|.|:|.:::.|||..|...:.:.:.|.:.:...  .|.
Mouse   327 MGMEDAFNKGKANFSGMSERNDLFLSEVFHQASVDVTEEGTVAAGGTGAVMTGRTGHGGP--QFV 389

  Fly   349 VNSPFVFMIRD--DDNIYFRGRVVDP 372
            .:.||:|.|.|  ...|.|.||...|
Mouse   390 ADHPFLFFIMDKITHTILFVGRFSSP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 109/411 (27%)
Serpinb2NP_001167641.1 SERPIN 4..415 CDD:294093 110/414 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 216 1.000 Domainoid score I2692
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 217 1.000 Inparanoid score I3582
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.980

Return to query results.
Submit another query.