DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpina3c

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:385 Identity:110/385 - (28%)
Similarity:177/385 - (45%) Gaps:35/385 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKN 72
            |...|:...|...||:.....|...||:.|||.:...::::.:||.|||..|:...||....:..
Mouse    64 LTLASINTDFAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETP 128

  Fly    73 VATI---YDKLLTKLER-GKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLK 133
            .|.|   :..||.:|.. |::|.| ...:.|||.:.:.:...:.:.....::|||........|:
Mouse   129 EADIHQGFGHLLQRLSHPGEQVQI-STGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLE 192

  Fly   134 AAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQ 198
            |...|||:|.:||...:|.:|  |||..|...|::|..:|||.||..|:..:|....||:.....
Mouse   193 ATKLINDYVSNQTQRKIKGLI--SDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRS 255

  Fly   199 VNVNMMSQVGRFKMRTSTI----DQ-----IIELPFAYSNLSMVIVLPKDNGSLTQAEA-----T 249
            |.|.||      |::|.|.    |:     ::||.:. .|.|.:.:|| |.|.:.|.||     |
Mouse   256 VKVPMM------KIKTLTTPYFRDEELSCTVVELKYK-GNASALFILP-DQGRMQQVEASLQPET 312

  Fly   250 IESYPQIVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHK 314
            :..:...:.......:.||||.|.....|...|..:||:::|:..:|:|.:.......:||:|||
Mouse   313 LRKWKNSLRPRKMGELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSGITGTKDLIVSQMVHK 377

  Fly   315 AFIEIDEEGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRDDD--NIYFRGRVVDP 372
            |.:::.|.|....:|:....|.|| ..||:   ..|..|:.:|...|  ...|..::..|
Mouse   378 AVLDVAETGTEGVAATGVNFRILS-RRTSL---WFNRTFLMVISHTDVQTTLFIAKITHP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 107/372 (29%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 110/385 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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