DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpini1

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_446231.1 Gene:Serpini1 / 116459 RGDID:619896 Length:410 Species:Rattus norvegicus


Alignment Length:378 Identity:105/378 - (27%)
Similarity:193/378 - (51%) Gaps:25/378 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDK--KNVATI 76
            :.:::..:|.......:..||:.|||.:.:.|.::.:||.|:|..|:|.::.....|  :..:.:
  Rat    26 IAEWSVNVYNHLRATGEDENILFSPLSIALAMGVMELGAQGSTLKEIRHSMGYESLKSGEEFSFL 90

  Fly    77 YD-KLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAIND 140
            .| ..:...|.|:.|  :.:||.|||.....:|:.:.:::..:|.||...:..::.:..|..||.
  Rat    91 RDFSSMVSAEEGQYV--MKIANSLFVQNGFHINEEFLQMMKMYFNAEVNHVDFSENVAVANYINK 153

  Fly   141 WVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMS 205
            ||.:.|...:||::.|.|........:|||.:|||.||::|...||:...|......:|.:.||.
  Rat   154 WVENYTNSLLKDLVSPGDFDAVTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMY 218

  Fly   206 QVGRF--------KMRTSTIDQIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIV----- 257
            |.|.|        ......|.|::|:|:....:||::||.:....|...|..::  ||::     
  Rat   219 QQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEVPLATLEPLLK--PQLIEEWAN 281

  Fly   258 -LTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDE 321
             :.:..|.|.||:|.::..::|.:.||::|:.::|...::::.:.::....:|:.|||:|||::|
  Rat   282 SVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIFIKDANLTAMSDKKELFLSKAVHKSFIEVNE 346

  Fly   322 EGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMI--RDDDNIYFRGRVVDP 372
            ||..|  |.||.:..:|..|.......|:.||:|:|  |....|.|.|||:.|
  Rat   347 EGSEA--AVASGMIAISRMAVLFPQVIVDHPFLFLIKNRKTGTILFMGRVMHP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 102/371 (27%)
Serpini1NP_446231.1 neuroserpin 23..410 CDD:239003 105/378 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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