DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and LOC110439158

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_021329696.1 Gene:LOC110439158 / 110439158 -ID:- Length:412 Species:Danio rerio


Alignment Length:382 Identity:92/382 - (24%)
Similarity:177/382 - (46%) Gaps:28/382 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVLGQFTKQLYRSFLQ--DNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPE---DKK 71
            ::...|...||:..::  |.:..||..||..|.:.:|.:.:||.|:|..:|.:.:....   ..:
Zfish    38 NINNDFAFHLYKRLIESPDYQSKNIFFSPFTVSMALSKLTLGAGGDTKQQLLSGIGYNSAIFSTE 102

  Fly    72 NVATIYDKLLTKLERGKKVAI-LHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLK-A 134
            .:..::..||..:  |.:..: :.:...|:.::....:.::.:.:.:.:..:...:..  |:| .
Zfish   103 EMHQLFHSLLEDI--GNRTGVDIDIGTALYASDRFKPHSKFLEDMKEFYHTDGFTVDF--RVKET 163

  Fly   135 AWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQV 199
            ...||.:|.::|...:...:  .||..|....::...:|||.|...|:...|....|::.....|
Zfish   164 VDQINKYVEEKTHGKINQAV--DDLEKDTLMFLLTYIYFKGKWDKPFNPEKTCESTFHIDDKTTV 226

  Fly   200 NVNMMSQVGRFKMRTSTIDQIIELPFAYS-NLSMVIVLPK--------DNGSLTQAEATIESYPQ 255
            .|.||.|....|:.......|..|...|: :.||.:.:|.        ::..:|.:...||.:.:
Zfish   227 PVQMMHQYEYLKVYYDAELSIKVLCLDYNDSFSMFLAVPDVHMGRKTIEDLEMTISRQHIEKWKR 291

  Fly   256 IVLTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEID 320
            ... |..|.:.:||..:.....|.:.||.||:.|:|:..:|.:. :::....||:|||||.::||
Zfish   292 SAF-ERKVDIYVPKLSLKTSYFLNDILKGMGMADMFSDKADFTG-VSEEKIFISKVVHKATLDID 354

  Fly   321 EEGGSAGSASASPIRGLSDYATSVVTFTVNSPFVFMIRD--DDNIYFRGRVVDPLKK 375
            |:|.:|.:.:....|.||....|.::|  :.||:..|.|  :|||.|.|:||:|.:|
Zfish   355 EKGTTAAAVTTVQFRQLSYSPLSTLSF--DRPFMIFITDQTNDNILFFGKVVNPNEK 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 88/370 (24%)
LOC110439158XP_021329696.1 alpha-1-antitrypsin_like 40..403 CDD:239011 88/372 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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