DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and Serpina3a

DIOPT Version :10

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:Serpina3a / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:395 Identity:110/395 - (27%)
Similarity:182/395 - (46%) Gaps:46/395 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILVTTSVLG----QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL--N 65
            |.|.:|.|.    .|...||:..:..|...||:.|...:...:.::.:||..||..|:...|  |
  Rat    30 IQVDSSTLSSCNTDFAFSLYKELVLKNPDKNIVFSSFSISTALVLLSLGAKNNTLKEILEGLKFN 94

  Fly    66 LPE-DKKNVATIYDKLLTKLE-RGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKL 128
            |.| .:..:...|:.||.:|. .|.:|.| ...:.||:.:.:.:...:.:.....::|||.:...
  Rat    95 LTETPEAEIHQGYEHLLQRLNLPGDQVQI-STGSALFIKKHLQILAEFQEKARALYQAEAFSTDF 158

  Fly   129 ADRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYV 193
            ....:|...|||:|..||...:|::|  |.|....|.|::|..:|||.||..||..:|....||:
  Rat   159 QQPHEAKKLINDYVRKQTQGKIKELI--SVLDKKTSMVLVNYIYFKGKWKMPFDPHDTFQSEFYL 221

  Fly   194 SKSYQVNVNMMSQVGRFKMRTSTID---------QIIELPFAYSNLSMVIVLPKDNGSLTQAEAT 249
            .:...|.|.||      |:...|..         .::||.:. .|.|.:.:|| |.|.:.|.||:
  Rat   222 DEKKSVKVPMM------KIEKLTTPYFRDEELSCSVLELKYT-GNASALFILP-DQGRMQQVEAS 278

  Fly   250 IESYPQIVLTEMDV-------HVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTR 307
            ::  |:.:....|.       .:::|||.|...|.|.:.|..:||:::|:..:|:|.:.......
  Rat   279 LQ--PETLRRWKDTLRPRRIDELRMPKFSISTDMRLGDILPELGIREVFSQQADLSRITGAKDLS 341

  Fly   308 ISQVVHKAFIEIDEEGGSAGSASA---SPIRGLSDYATSVVTFTVNSPFVFMIRDDDN--IYFRG 367
            :|||||||.:::.|.|..|.:|:.   .|:.....|    ||...|.||:.:|.|.:.  ..|..
  Rat   342 VSQVVHKAVLDVTETGTEAAAATGVKIIPMCAKFYY----VTMYFNRPFLMIISDTNTHIALFMA 402

  Fly   368 RVVDP 372
            :|.:|
  Rat   403 KVTNP 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 107/388 (28%)
Serpina3aXP_006240581.2 serpinA3_A1AC 27..408 CDD:381019 110/395 (28%)

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