DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and LOC100909605

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:LOC100909605 / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:395 Identity:110/395 - (27%)
Similarity:182/395 - (46%) Gaps:46/395 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILVTTSVLG----QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTAL--N 65
            |.|.:|.|.    .|...||:..:..|...||:.|...:...:.::.:||..||..|:...|  |
  Rat    30 IQVDSSTLSSCNTDFAFSLYKELVLKNPDKNIVFSSFSISTALVLLSLGAKNNTLKEILEGLKFN 94

  Fly    66 LPE-DKKNVATIYDKLLTKLE-RGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKL 128
            |.| .:..:...|:.||.:|. .|.:|.| ...:.||:.:.:.:...:.:.....::|||.:...
  Rat    95 LTETPEAEIHQGYEHLLQRLNLPGDQVQI-STGSALFIKKHLQILAEFQEKARALYQAEAFSTDF 158

  Fly   129 ADRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYV 193
            ....:|...|||:|..||...:|::|  |.|....|.|::|..:|||.||..||..:|....||:
  Rat   159 QQPHEAKKLINDYVRKQTQGKIKELI--SVLDKKTSMVLVNYIYFKGKWKMPFDPHDTFQSEFYL 221

  Fly   194 SKSYQVNVNMMSQVGRFKMRTSTID---------QIIELPFAYSNLSMVIVLPKDNGSLTQAEAT 249
            .:...|.|.||      |:...|..         .::||.:. .|.|.:.:|| |.|.:.|.||:
  Rat   222 DEKKSVKVPMM------KIEKLTTPYFRDEELSCSVLELKYT-GNASALFILP-DQGRMQQVEAS 278

  Fly   250 IESYPQIVLTEMDV-------HVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTR 307
            ::  |:.:....|.       .:::|||.|...|.|.:.|..:||:::|:..:|:|.:.......
  Rat   279 LQ--PETLRRWKDTLRPRRIDELRMPKFSISTDMRLGDILPELGIREVFSQQADLSRITGAKDLS 341

  Fly   308 ISQVVHKAFIEIDEEGGSAGSASA---SPIRGLSDYATSVVTFTVNSPFVFMIRDDDN--IYFRG 367
            :|||||||.:::.|.|..|.:|:.   .|:.....|    ||...|.||:.:|.|.:.  ..|..
  Rat   342 VSQVVHKAVLDVTETGTEAAAATGVKIIPMCAKFYY----VTMYFNRPFLMIISDTNTHIALFMA 402

  Fly   368 RVVDP 372
            :|.:|
  Rat   403 KVTNP 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 104/377 (28%)
LOC100909605XP_006240581.2 alpha-1-antitrypsin_like 41..404 CDD:239011 104/379 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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