DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Da and serpine3

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_031752090.1 Gene:serpine3 / 100497951 XenbaseID:XB-GENE-6044687 Length:450 Species:Xenopus tropicalis


Alignment Length:418 Identity:98/418 - (23%)
Similarity:167/418 - (39%) Gaps:64/418 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKLL 81
            |..:||::.:....:.|::.||..|...:.::..||.|||..::.:.|........|....:.:.
 Frog    37 FAVRLYQTLVNMENRTNLVVSPSSVASSLGLLQFGAQGNTFAQMESILGYNVHDVTVQDFMETMF 101

  Fly    82 TKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDWVLDQT 146
            :.|....:...:|||..||:......:.|:.:.......:..:....::....|..||.||...|
 Frog   102 SGLANSSQGTAIHLACALFIQTGTTFSPRFIQYAALWANSSLQLANFSEPGMTATQINQWVSSNT 166

  Fly   147 LDNVKDIIIP----------------------------------------SDLTP-DE------S 164
            .......::|                                        ..|.| ||      .
 Frog   167 GGEYPQYLVPISCPYAHEAHYILLYLARLRVYKLYLQLIIICQMALTCGIQPLVPCDEFGPVFPQ 231

  Fly   165 AVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQV-----GRFKMRTSTIDQIIELP 224
            ..:::..:||..|||:|...:|:...|..:....:.|.||.|.     |:|:..:.....::|||
 Frog   232 IALVSTMYFKSTWKTKFSFTDTQTLPFISTDGSTIKVPMMHQTADVNYGQFETPSLKRFTVVELP 296

  Fly   225 FAYSNLSMVIVLPKDNG---SLTQAEATIESYPQIV--LTEMDVHVQLPKFKIDFRMELVETLKS 284
            :..:.:||.:|.|.|..   |..:|..|.:|..|..  :..|.:.|.||:|::.....|...|.:
 Frog   297 YIGNTVSMFVVRPSDRNTPLSCIEANLTSKSMAQWANSMKRMKMDVFLPRFRLQSHSNLRNVLPA 361

  Fly   285 MGIQDLFNS-SSDISVLLNQSGTRISQVVHKAFIEIDEEGGSAGSASASPIRGLSDYATSVVTFT 348
            :|..|||:. .::...:..|||..|||.:|||.||:.|.|..|...:|..:...|    .:..|.
 Frog   362 LGATDLFDPWKANFKGISEQSGLYISQAIHKAEIEVAEGGTRASGVTAMVLLKRS----RMPVFK 422

  Fly   349 VNSPFVFMIR--DDDNIYFRGRVVDPLK 374
            .:.||.|.:|  ...:|.|.|||.:||:
 Frog   423 ADRPFFFFLRQASSGSILFIGRVTNPLE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 94/411 (23%)
serpine3XP_031752090.1 serpinE3 22..448 CDD:381040 96/414 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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