DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and serpinb10

DIOPT Version :9

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_031760330.1 Gene:serpinb10 / 100497689 XenbaseID:XB-GENE-5769609 Length:374 Species:Xenopus tropicalis


Alignment Length:373 Identity:99/373 - (26%)
Similarity:187/373 - (50%) Gaps:23/373 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPEDKKNVATIYDKL 80
            :||..:.|...:.....|::.|.:.:.|.::|:.:||.||||.::..||:. ::.::|...:..|
 Frog     9 EFTIDVLREISKTAAGQNVVFSSMSIMISLAMVYLGAHGNTAADMGKALHF-DEVEDVHAQFRVL 72

  Fly    81 LTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWA-INDWVLD 144
            |.:|.:......|...|:||..:.......:.|.:|..:.|..|.:..:...:|..: ||.|:.:
 Frog    73 LKELMKNGNDYTLTTVNKLFGEKKYYFLPTFLKAINAFYGAPLEKVDFSSNPEATRSYINAWIQE 137

  Fly   145 QTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQVGR 209
            :|...:::::..:.::|:...::.|..:|...|.|:|.:..|....|.:..:.|:.||||:.:..
 Frog   138 KTKGKIQNLLPENSISPNTVLMVANTLYFLANWTTQFSEHATSKAPFTLITNEQIKVNMMATMNT 202

  Fly   210 FKMR--TSTIDQIIELPFA-YSNLSMVIVLPKDNGSLTQAEATIESYPQIV-------LTEMDVH 264
            |.|:  .:....::|||:. ..:|||||:||.::..||:.:..| ||..:.       ::...:.
 Frog   203 FNMKRIKNPGMSVLELPYGDTKDLSMVIMLPDNSTVLTKVDREI-SYENLSKWTRSENMSSNYLA 266

  Fly   265 VQLPKFKIDFRMELVETLKSMGIQDLFNSS-SDISVLLNQSGTRISQVVHKAFIEIDEEGGSAGS 328
            |.||:|:::....|.:.|.|:|:...|:.| ::.|.:..|....:|.|.||.|||::|:|..|.|
 Frog   267 VYLPRFRMEKSFSLKKVLSSLGMSSAFSQSRANFSGMGKQKQLYVSDVHHKTFIEVNEKGTEAAS 331

  Fly   329 ASAS--PIRGLSDYATSVVTFTVNSPFVFMIRDDDN--IYFRGRVVDP 372
            |:.|  .||.|::     ..|..:.||.|.||.:..  |...|:...|
 Frog   332 ATGSVMSIRSLAN-----EEFKADRPFHFFIRHNKTNCILLYGKFYSP 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 98/368 (27%)
serpinb10XP_031760330.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.