DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Da and serpinb4

DIOPT Version :10

Sequence 1:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_002936465.2 Gene:serpinb4 / 100490314 XenbaseID:XB-GENE-5787878 Length:392 Species:Xenopus tropicalis


Alignment Length:391 Identity:108/391 - (27%)
Similarity:199/391 - (50%) Gaps:44/391 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLPE------------ 68
            :|:..|.:...::.::.||:.|||.:...|.::|:|:.|:||.|:....:.|.            
 Frog    10 EFSLDLCKELKKNPEKKNILFSPLSICSAMGLVLLGSKGDTAAEIEKVFHFPAAAGSRSSKPSCQ 74

  Fly    69 ----DKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAI--- 126
                ..:.|..::..|.:.|.:......|.:|||.:..::...:::|...:.:.:.|..|::   
 Frog    75 QQTCQAQGVHLLFKDLFSTLNKPNDHYELSIANRAYGEKSFPFSEQYLLCIEQLYNATLESVDFK 139

  Fly   127 -KLADRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKV 190
             |..|.::   .||.||..:|...::::.....|....:..::||.:|||.||.:|.|.||....
 Frog   140 TKADDVIQ---QINAWVESKTKGKIQNLFAKGSLDSTTALALVNAVYFKGSWKKQFKKENTTDAP 201

  Fly   191 FYVSKSYQVNVNMMSQVGRFKMRTS--TIDQIIELPFAYSNLSMVIVLPKDNGSLTQAEA--TIE 251
            |:::|:.:.:|.||||.|::|:.::  ...:|::||:. ...||.|:||.|...|.:.|.  |.|
 Frog   202 FFLNKNDKTSVKMMSQKGKYKLGSNPELKCRILKLPYE-EGFSMKIILPDDIDGLAELETHLTYE 265

  Fly   252 SYPQIV----LTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVV 312
            ::.:::    ..|:.|.|:||:||......|.|.|:|||:...|: .:::|.:.:::|..||.||
 Frog   266 TFTKLMDLQRTREVQVVVKLPQFKFGETYSLTEVLQSMGMTSAFH-GANLSGISDKAGLAISTVV 329

  Fly   313 HKAFIEIDEEGGSAGSASASPIRGLSDYATSV----VTFTVNSPFVFMIR--DDDNIYFRGRVVD 371
            ||::||::|||..|.:|:     |:....||.    ..|.|:.||:|.|.  ...::.|.||...
 Frog   330 HKSYIEVNEEGTEAAAAT-----GIGITVTSAPLPPQEFIVDRPFLFCIEHISTKSLLFYGRFTF 389

  Fly   372 P 372
            |
 Frog   390 P 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 107/389 (28%)
serpinb4XP_002936465.2 serpinB 10..387 CDD:381072 106/386 (27%)

Return to query results.
Submit another query.