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Protein Alignment SmE and LSM10
DIOPT Version :9
Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_116270.1 |
Gene: | LSM10 / 84967 |
HGNCID: | 17562 |
Length: | 123 |
Species: | Homo sapiens |
Alignment Length: | 102 |
Identity: | 21/102 - (20%) |
Similarity: | 41/102 - (40%) |
Gaps: | 19/102 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIE----GHIVGFDEYMNLVLDDAE 61
|:...:.|.:.:....:.::.:.||.| ...:.||.| |.|...|.:||:.| |:
Human 1 MAVSHSVKERTISENSLIILLQGLQGR-------VTTVDLRDESVAHGRIDNVDAFMNIRL--AK 56
Fly 62 EVYV-KTRQRRNLGRIMLKGDNITLIQ-----NVSPT 92
..|. :...:..|..:.:.|.|:..:. |::.|
Human 57 VTYTDRWGHQVKLDDLFVTGRNVRYVHIPDDVNITST 93
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmE | NP_609162.1 |
Sm_E |
10..88 |
CDD:212465 |
17/87 (20%) |
LSM10 | NP_116270.1 |
LSm10 |
8..85 |
CDD:212480 |
18/85 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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