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Protein Alignment SmE and SNRNP-G
DIOPT Version :10
| Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_179971.1 |
Gene: | SNRNP-G / 816925 |
AraportID: | AT2G23930 |
Length: | 80 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 91 |
Identity: | 22/91 - (24%) |
| Similarity: | 48/91 - (52%) |
Gaps: | 16/91 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVYV 65
||..|.|...| :|:..:.:::: |.:..:.|.:.|||::||||:|:..| |
plant 1 MSRSGQPPDLK----------KYMDKKLQIKL----NANRMVTGTLRGFDQFMNLVVDNTVE--V 49
Fly 66 KTRQRRNLGRIMLKGDNITLIQNVSP 91
....:.::|.::::|::|..::.:.|
plant 50 NGNDKTDIGMVVIRGNSIVTVEALEP 75
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmE | NP_609162.1 |
Sm_E |
10..88 |
CDD:212465 |
17/77 (22%) |
| SNRNP-G | NP_179971.1 |
Sm_G |
6..74 |
CDD:212466 |
18/83 (22%) |
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