DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmE and EMB2816

DIOPT Version :10

Sequence 1:NP_609162.1 Gene:SmE / 34080 FlyBaseID:FBgn0261790 Length:94 Species:Drosophila melanogaster
Sequence 2:NP_178480.1 Gene:EMB2816 / 814913 AraportID:AT2G03870 Length:99 Species:Arabidopsis thaliana


Alignment Length:60 Identity:23/60 - (38%)
Similarity:35/60 - (58%) Gaps:12/60 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RIEGHIVGFDEYMNLVLDDAEEVYVK--------TRQRRNLGRIMLKGDNITLIQNVSPT 92
            ::.|.:.|:|:.:|||||:|.| :|:        |.|.|.||.|:.:|   |.:..||||
plant    28 QVTGTLKGYDQLLNLVLDEAVE-FVRDHDDPLKTTDQTRRLGLIVCRG---TAVMLVSPT 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmENP_609162.1 Sm_E 10..88 CDD:212465 19/54 (35%)
EMB2816NP_178480.1 LSm7 5..93 CDD:212476 23/60 (38%)

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