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Protein Alignment SmE and Lsm6
DIOPT Version :10
| Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_084421.1 |
Gene: | Lsm6 / 78651 |
MGIID: | 1925901 |
Length: | 80 |
Species: | Mus musculus |
| Alignment Length: | 50 |
Identity: | 15/50 - (30%) |
| Similarity: | 25/50 - (50%) |
Gaps: | 1/50 - (2%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 37 NISLRIEGHIVGFDEYMNLVLDDAEEVYVKTRQRRNLGRIMLKGDNITLI 86
|..:...|.:...|.|||:.|:..|| ||..:.:...|...::|:|:..|
Mouse 25 NSGVDYRGVLACLDGYMNIALEQTEE-YVNGQLKNKYGDAFIRGNNVLYI 73
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmE | NP_609162.1 |
Sm_E |
10..88 |
CDD:212465 |
14/49 (29%) |
| Lsm6 | NP_084421.1 |
LSm6 |
7..74 |
CDD:212473 |
14/49 (29%) |
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