powered by:
Protein Alignment SmE and Snrpf
DIOPT Version :10
| Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001119563.1 |
Gene: | Snrpf / 680737 |
RGDID: | 1588229 |
Length: | 86 |
Species: | Rattus norvegicus |
| Alignment Length: | 96 |
Identity: | 21/96 - (21%) |
| Similarity: | 45/96 - (46%) |
Gaps: | 18/96 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSFKGNPK--VQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEV 63
||...||| :..:..:|:.:..:: .:..:|::|..|.|||:.|.:.||
Rat 1 MSLPLNPKPFLNGLTGKPVMVKLKW---------------GMEYKGYLVSVDGYMNMQLANTEE- 49
Fly 64 YVKTRQRRNLGRIMLKGDNITLIQNVSPTKD 94
|:......:||.::::.:|:..|:.|...::
Rat 50 YIDGALSGHLGEVLIRCNNVLYIRGVEEEEE 80
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmE | NP_609162.1 |
Sm_E |
10..88 |
CDD:212465 |
15/77 (19%) |
| Snrpf | NP_001119563.1 |
Sm_F |
6..74 |
CDD:212469 |
18/83 (22%) |
Return to query results.
Submit another query.
