DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmE and Lsm7

DIOPT Version :10

Sequence 1:NP_609162.1 Gene:SmE / 34080 FlyBaseID:FBgn0261790 Length:94 Species:Drosophila melanogaster
Sequence 2:NP_001346078.1 Gene:Lsm7 / 66094 MGIID:1913344 Length:114 Species:Mus musculus


Alignment Length:67 Identity:20/67 - (29%)
Similarity:34/67 - (50%) Gaps:15/67 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 YENISLRIE--------GHIVGFDEYMNLVLD-------DAEEVYVKTRQRRNLGRIMLKGDNIT 84
            |.:.::|::        |.:.|||..:|||||       |.::.|..|...|.||.::.:|.::.
Mouse    29 YIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTEDTRQLGLVVCRGTSVV 93

  Fly    85 LI 86
            ||
Mouse    94 LI 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmENP_609162.1 Sm_E 10..88 CDD:212465 20/67 (30%)
Lsm7NP_001346078.1 LSm7 20..108 CDD:212476 20/67 (30%)

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