DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmE and LSM8

DIOPT Version :10

Sequence 1:NP_609162.1 Gene:SmE / 34080 FlyBaseID:FBgn0261790 Length:94 Species:Drosophila melanogaster
Sequence 2:NP_057284.1 Gene:LSM8 / 51691 HGNCID:20471 Length:96 Species:Homo sapiens


Alignment Length:56 Identity:18/56 - (32%)
Similarity:32/56 - (57%) Gaps:3/56 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IEGHIVGFDEYMNLVLDDAEEVYVKTRQ---RRNLGRIMLKGDNITLIQNVSPTKD 94
            |.|.:.|||:.:||:||::.|....:.|   :..||..:::|||:.:|..:....|
Human    23 IVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmENP_609162.1 Sm_E 10..88 CDD:212465 17/48 (35%)
LSM8NP_057284.1 LSm8 3..92 CDD:212474 18/56 (32%)

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