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Protein Alignment SmE and snrpe
DIOPT Version :9
Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001005147.1 |
Gene: | snrpe / 448738 |
XenbaseID: | XB-GENE-5922245 |
Length: | 92 |
Species: | Xenopus tropicalis |
Alignment Length: | 90 |
Identity: | 68/90 - (75%) |
Similarity: | 83/90 - (92%) |
Gaps: | 1/90 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSFKG-NPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVY 64
|:::| ..||||||||||||||||||||||:||||||.:::||||.|:|||||||||||||||::
Frog 1 MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIH 65
Fly 65 VKTRQRRNLGRIMLKGDNITLIQNV 89
:||:.|:.|||||||||||||:|:|
Frog 66 LKTKSRKQLGRIMLKGDNITLLQSV 90
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmE | NP_609162.1 |
Sm_E |
10..88 |
CDD:212465 |
62/77 (81%) |
snrpe | NP_001005147.1 |
Sm_E |
11..89 |
CDD:212465 |
62/77 (81%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
72 |
1.000 |
Domainoid score |
I9248 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H37729 |
Inparanoid |
1 |
1.050 |
91 |
1.000 |
Inparanoid score |
I4964 |
OMA |
1 |
1.010 |
- |
- |
|
QHG53877 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1594132at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002953 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto103509 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR11193 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1273 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X2313 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
13 | 13.110 |
|
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