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Protein Alignment SmE and snrpg
DIOPT Version :10
| Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001004660.2 |
Gene: | snrpg / 447922 |
ZFINID: | ZDB-GENE-040912-105 |
Length: | 76 |
Species: | Danio rerio |
| Alignment Length: | 87 |
Identity: | 22/87 - (25%) |
| Similarity: | 44/87 - (50%) |
Gaps: | 16/87 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSFKGNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVYV 65
||....|:::|.|.:.::|.. |....::|.:.|||.:||||:||..|: .
Zfish 1 MSKAHPPELKKFMDKKLSLKL---------------NGGRHVQGILRGFDPFMNLVVDDTIEM-A 49
Fly 66 KTRQRRNLGRIMLKGDNITLIQ 87
...|...:|.::::|::|.:::
Zfish 50 PGGQMNTIGMVVIRGNSIIMLE 71
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmE | NP_609162.1 |
Sm_E |
10..88 |
CDD:212465 |
19/78 (24%) |
| snrpg | NP_001004660.2 |
Sm_G |
5..74 |
CDD:212466 |
20/83 (24%) |
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