DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmE and LSm7

DIOPT Version :10

Sequence 1:NP_609162.1 Gene:SmE / 34080 FlyBaseID:FBgn0261790 Length:94 Species:Drosophila melanogaster
Sequence 2:NP_609807.1 Gene:LSm7 / 35003 FlyBaseID:FBgn0261068 Length:110 Species:Drosophila melanogaster


Alignment Length:90 Identity:27/90 - (30%)
Similarity:45/90 - (50%) Gaps:15/90 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GNPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLD-------DAEE 62
            |..|.:|..:..::   :||:.:.||:.......|    |.:.|:|..:|||||       |::|
  Fly    12 GKEKRRKESILDLS---KYLEKQIRVKFAGGREAS----GILKGYDALLNLVLDNTVEYLRDSDE 69

  Fly    63 VYVKT-RQRRNLGRIMLKGDNITLI 86
            .|..| .|.|:||.::.:|..:.||
  Fly    70 PYKLTEEQTRSLGLVVCRGTALVLI 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmENP_609162.1 Sm_E 10..88 CDD:212465 25/85 (29%)
LSm7NP_609807.1 LSm7 18..107 CDD:212476 25/84 (30%)

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