DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmE and Sbat

DIOPT Version :9

Sequence 1:NP_609162.1 Gene:SmE / 34080 FlyBaseID:FBgn0261790 Length:94 Species:Drosophila melanogaster
Sequence 2:NP_001259971.1 Gene:Sbat / 319043 FlyBaseID:FBgn0051950 Length:121 Species:Drosophila melanogaster


Alignment Length:71 Identity:22/71 - (30%)
Similarity:36/71 - (50%) Gaps:6/71 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RSRVQVWLYENISLRI-EGHI-VGF----DEYMNLVLDDAEEVYVKTRQRRNLGRIMLKGDNITL 85
            |.::|.||...:.:.| :|.: |||    |...|:||....|..|:.::.|.||.:|:.|.:|..
  Fly    42 RRKLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEYLVEGQEPRLLGNVMVPGQHIVS 106

  Fly    86 IQNVSP 91
            :....|
  Fly   107 LSIDEP 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmENP_609162.1 Sm_E 10..88 CDD:212465 21/66 (32%)
SbatNP_001259971.1 LSMD1 42..110 CDD:212486 21/67 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1958
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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