Protein Alignment SmE and Lsm5

DIOPT Version :10

• Sequence 1: NP_609162.1
• Gene: SmE / 34080
• FlyBaseID: FBgn0261790
• Length: 94
• Species: Drosophila melanogaster
• Sequence 2: NP_001100759.1
• Gene: Lsm5 / 306222
• RGDID: 1308655
• Length: 91
• Species: Rattus norvegicus
• Alignment Length: 83
• Identity: 24/83 - (28%)
• Similarity: 45/83 - (54%)
• Gaps: 10/83 - (12%)

  Fly     6 NPKVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVYVKTRQR 70
            ||.    .:.|:.|:.:.:.:|    :.:.......|.|.::|||:::|:||:|..|..:....|
  Rat     8 NPS----QLLPLELVDKCIGSR----IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGR 64

  Fly    71 R--NLGRIMLKGDNITLI 86
            |  .|.:|:|.|:|||::
  Rat    65 RITKLDQILLNGNNITML 82

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmE	NP_609162.1	Sm_E	10..88	CDD:212465	22/79 (28%)
Lsm5	NP_001100759.1	LSm5	11..86	CDD:212479	22/76 (29%)