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Protein Alignment SmE and snrpd1
DIOPT Version :9
Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_775359.1 |
Gene: | snrpd1 / 192331 |
ZFINID: | ZDB-GENE-020419-14 |
Length: | 119 |
Species: | Danio rerio |
Alignment Length: | 84 |
Identity: | 21/84 - (25%) |
Similarity: | 37/84 - (44%) |
Gaps: | 13/84 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 IFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVYVKTRQRRNLGRIMLKGDNI- 83
:.|:|...|...|.:......::.|.|.|.|..||..| .|.::.:|.|:...|..:.::|:||
Zfish 3 LVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHL-KAVKMTLKNREPTQLESLSIRGNNIR 66
Fly 84 -----------TLIQNVSP 91
||:.::.|
Zfish 67 YFILPDSLPLDTLLVDIEP 85
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmE | NP_609162.1 |
Sm_E |
10..88 |
CDD:212465 |
20/79 (25%) |
snrpd1 | NP_775359.1 |
Sm_D1 |
2..93 |
CDD:212471 |
21/84 (25%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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