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Protein Alignment SmE and lsm-7
DIOPT Version :10
| Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_502034.1 |
Gene: | lsm-7 / 177988 |
WormBaseID: | WBGene00003081 |
Length: | 104 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 50 |
Identity: | 15/50 - (30%) |
| Similarity: | 20/50 - (40%) |
Gaps: | 8/50 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 14 AASEASYLPYD----DVLSYQHSYGYGLPVSKVVYGSSYGLPAALDKYSY 59
|.|:....|.| :|..|....|||..|: .||..|.....:|:|
Worm 262 AISKKRQRPIDQGKRNVEDYGDESGYGNDVA----ASSSALIGMSQEYTY 307
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmE | NP_609162.1 |
Sm_E |
10..88 |
CDD:212465 |
14/49 (29%) |
| lsm-7 | NP_502034.1 |
LSm7 |
10..98 |
CDD:212476 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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