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Protein Alignment SmE and Snrpb
DIOPT Version :9
Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_599185.1 |
Gene: | Snrpb / 171365 |
RGDID: | 621301 |
Length: | 231 |
Species: | Rattus norvegicus |
Alignment Length: | 92 |
Identity: | 23/92 - (25%) |
Similarity: | 42/92 - (45%) |
Gaps: | 21/92 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 MVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEV---------YVKTR 68
|:|.|:...|.:....|:.: |....||::|||:|.|.:|. ..:..
Rat 9 MLQHIDYRMRCILQDGRIFI-----------GTFKAFDKHMNLILCDCDEFRKIKPKNSKQAERE 62
Fly 69 QRRNLGRIMLKGDN-ITLIQNVSPTKD 94
::|.||.::|:|:| :::.....|.||
Rat 63 EKRVLGLVLLRGENLVSMTVEGPPPKD 89
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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