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Protein Alignment SmE and LSm1
DIOPT Version :10
| Sequence 1: | NP_609162.1 |
Gene: | SmE / 34080 |
FlyBaseID: | FBgn0261790 |
Length: | 94 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_321407.3 |
Gene: | LSm1 / 1281490 |
VectorBaseID: | AGAMI1_003627 |
Length: | 134 |
Species: | Anopheles gambiae |
| Alignment Length: | 71 |
Identity: | 18/71 - (25%) |
| Similarity: | 38/71 - (53%) |
Gaps: | 10/71 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 29 RVQVWLYENISLRIEGHIVGFDEYMNLVLD-DAEEVYVKTR----QRRNLGRIMLKGDNITLIQN 88
::.|.|::..:| .|::...|::.||||. ..|.::|... || |.::::|:|:.|:..
Mosquito 18 KLMVLLHDGRTL--IGYLRSVDQFANLVLHRTIERIHVGNEYGDIQR---GVVIIRGENVVLLGE 77
Fly 89 VSPTKD 94
:...|:
Mosquito 78 IDREKE 83
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmE | NP_609162.1 |
Sm_E |
10..88 |
CDD:212465 |
17/63 (27%) |
| LSm1 | XP_321407.3 |
LSm1 |
5..78 |
CDD:212475 |
17/64 (27%) |
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