DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlE and TwdlC

DIOPT Version :10

Sequence 1:NP_609157.3 Gene:TwdlE / 34075 FlyBaseID:FBgn0031957 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_651519.1 Gene:TwdlC / 43245 FlyBaseID:FBgn0039469 Length:360 Species:Drosophila melanogaster


Alignment Length:285 Identity:105/285 - (36%)
Similarity:129/285 - (45%) Gaps:91/285 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SSCVLVVLMALAALVAARPEPPRD-SYSAPPSSSYQPSGPSGGYGA------PAPQ------YGP 54
            ||..:|.:.:|.|....|||||.. ||...|....|.:.|...:..      |.||      :.|
  Fly     4 SSLFVVCVASLVATTLGRPEPPSPYSYHGLPQQQSQRALPLNAHPVPPQIYQPLPQEQSFANFAP 68

  Fly    55 PQQ---------------APV-------------------------------------IHKHVYV 67
            |||               ||.                                     :|||:||
  Fly    69 PQQTYLPPQMHLDAIEQVAPTAAAAEPLNAYDDSYNMAHRLSGVQHASGYNNGPQETKVHKHIYV 133

  Fly    68 HVPPPEPEYQ---APRKPLYVPPPQKHYKIVFIKAPSPPVPTAPVIPQFPQNEEKTLVYVLVKKP 129
            ||||.:.|.:   ..|......|.|||||||||||||.|....||:|..||||||||:|||.|||
  Fly   134 HVPPKDFEEEDAIQTRVHHQQGPKQKHYKIVFIKAPSAPAIRQPVVPPPPQNEEKTLIYVLHKKP 198

  Fly   130 EEQPEIIIPTPAPTQPSKPEVYFIRYKTQKEET---GPYPNSVAP---------PAPEYG----- 177
            |::.:|:||||.||:|||||||||:|||:|:|.   ||.|..:.|         |..|..     
  Fly   199 EQEQDIVIPTPPPTKPSKPEVYFIKYKTKKDEAPVYGPPPAEMEPRQATAEDFAPLAEVADVLPP 263

  Fly   178 ---APAAPP---APSAPSSSYGAPS 196
               |||..|   .|:.||:.||.|:
  Fly   264 TTLAPAPEPEVEQPAIPSAVYGPPT 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlENP_609157.3 DM5 59..158 CDD:214776 63/138 (46%)
TwdlCNP_651519.1 DUF243 125..227 CDD:472232 62/101 (61%)

Return to query results.
Submit another query.