DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlE and TwdlK

DIOPT Version :9

Sequence 1:NP_609157.3 Gene:TwdlE / 34075 FlyBaseID:FBgn0031957 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_651488.1 Gene:TwdlK / 43205 FlyBaseID:FBgn0039439 Length:247 Species:Drosophila melanogaster


Alignment Length:240 Identity:60/240 - (25%)
Similarity:89/240 - (37%) Gaps:64/240 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SCVLVVLMALAAL---------VAARPE----PPRDSYS------AP-PSSSYQPSGPS------ 42
            |.|::..:|||..         ||..|.    .|..|.|      || ||:|:.| |||      
  Fly     3 SFVVLCFIALATADKLGYNYQPVAHSPSGLSFQPSGSASSDAPAFAPAPSASFAP-GPSSIADAL 66

  Fly    43 -GGYGAPAPQYGPPQQAPVIHKHVYVHVPPPEPEYQAPRKPLYVPPPQKHYKIVFIKAP-SPPVP 105
             |...|.||.|..||..  :.|..:.:.......|.............|..::||||.| :..:.
  Fly    67 EGSQSAAAPNYAAPQAQ--LEKEFFTYTADEGDFYDPSASDRVANAVNKGLRVVFIKGPENSGLE 129

  Fly   106 TAPVIPQFPQNEEKTLVYVLVKKPEEQPEI-----IIPTPAPTQPSKPEVYFIRYKTQKEET--- 162
            .|.:.......:::|.:|||.|    |.:|     .:.:......:||||:|::|:|.::..   
  Fly   130 DAALALAKQAAQQETAIYVLNK----QADIGDLANKLNSIRNNNNNKPEVHFVKYRTPEDAANAQ 190

  Fly   163 ----GPYP-----------------NSVAPPAPEYGAPAAPPAPS 186
                |.|.                 |..:.|||.....|:.|.||
  Fly   191 SAIQGQYDQLGGSSQSQNGGVASTLNFASQPAPRESTAASAPGPS 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlENP_609157.3 DM5 59..158 CDD:214776 22/104 (21%)
TwdlKNP_651488.1 DM5 82..183 CDD:214776 22/106 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450412
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR31927
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.