DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlE and Twdlbeta

DIOPT Version :10

Sequence 1:NP_609157.3 Gene:TwdlE / 34075 FlyBaseID:FBgn0031957 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_610707.2 Gene:Twdlbeta / 36265 FlyBaseID:FBgn0033658 Length:198 Species:Drosophila melanogaster


Alignment Length:204 Identity:103/204 - (50%)
Similarity:126/204 - (61%) Gaps:24/204 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHSSCVLVVLMALAALVAARPEPPRDSYSAP----PSSSYQPSGPSGG----YGAPAPQYGPPQQ 57
            |.:.|:|::|.|..|:..|||||||..|..|    |...|.|..|:..    ||.||..||||..
  Fly     1 MQTQCILLLLAASLAICVARPEPPRSRYGPPPPPAPQKEYGPPAPAAQPLPVYGPPAAFYGPPAA 65

  Fly    58 A-PVIHKHVYVHVPPPEPEYQAPRKPLYVPPPQKHYKIVFIKAPSPPVPTAPVIPQFPQNEEKTL 121
            : .::.|:|||||||.|||:.....|:....|:|||||:|||||:||.|...|:|...|:|.|||
  Fly    66 SEALVTKNVYVHVPPEEPEFYPASSPIQTAVPKKHYKIIFIKAPNPPTPVRQVLPPPVQDEHKTL 130

  Fly   122 VYVLVKKPEEQPEIIIPTPAPTQPSKPEVYFIRYKTQKEETGPYPNSVAPPAPEYGAPAAPPAPS 186
            |||||||||||..:|:|.|.||:|||||||||:||.|:          |.||.:||     |.||
  Fly   131 VYVLVKKPEEQQPVILPAPEPTEPSKPEVYFIKYKQQQ----------AKPATQYG-----PPPS 180

  Fly   187 APSSSYGAP 195
            |||..||||
  Fly   181 APSEEYGAP 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlENP_609157.3 DM5 59..158 CDD:214776 60/98 (61%)
TwdlbetaNP_610707.2 DM5 68..167 CDD:214776 60/98 (61%)

Return to query results.
Submit another query.