DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14535 and neb

DIOPT Version :9

Sequence 1:NP_001285726.1 Gene:CG14535 / 34073 FlyBaseID:FBgn0031955 Length:1131 Species:Drosophila melanogaster
Sequence 2:NP_476817.1 Gene:neb / 35293 FlyBaseID:FBgn0004374 Length:1121 Species:Drosophila melanogaster


Alignment Length:1158 Identity:212/1158 - (18%)
Similarity:371/1158 - (32%) Gaps:409/1158 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NGGFCGALQRAPPPMP-PTLIRRLSSRECY-------------------GVGKVKVMLRVADRDR 56
            |..|.|:   .|.|.| ||.:     ..||                   |.||.... |..:||.
  Fly    52 NTAFSGS---TPQPKPKPTAL-----NACYTPSSLYRNANSTPGRAKTPGTGKSSCS-RTKERDS 107

  Fly    57 -----NSGGTEPDFM---------ALDKKKRQVT-----------LTDPRTACPPPQAAQERAPM 96
                 .|...|.:.:         ||:..:.|||           ||        .||.......
  Fly   108 LMESCLSVSEESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELT--------VQAGSSADAS 164

  Fly    97 VAAPKMFAFDNLFTGED--KQSDVCASALSE-----VIPAVLEGSDGCLLAMGYPATGQAQTVLG 154
            ......|::|.::...|  :::..|.:.:.|     :|....||.:.||.|.|...:|::.:::|
  Fly   165 AGVTHFFSYDQVYYSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMG 229

  Fly   155 -------ELGGGSGSGSASGSGVACSLGAAPCAIAWLYKGIQERRQKSGARFSVRVSAVGVSATK 212
                   .|.||.....|         |..|.....|::.|:..:.:...:..|.||...:...|
  Fly   230 IEALDDAALDGGPPHDEA---------GIIPRFCHELFRRIEAVKSQQQLQVEVEVSYFEIYNEK 285

  Fly   213 PDALSQDLL-ISHAA------------ESDDSPGIYLRDDFLGGP--TELRAPTAER-AALFLDS 261
                ..||| :.|||            :....|.:.:|:..:.||  .:|.|.:.:. :||....
  Fly   286 ----IHDLLSVQHAAAATGESTPIQQQQQQQRPALKVREHPIFGPYVVDLSAHSVDSYSALRNWL 346

  Fly   262 ALAGRLKSSGSTASGSSGCAAPLESALIFTLHVYQYSLSRKGGVAGG-------------RSRLH 313
            |:....:::.|||......    .|..||.:.:....||...|::..             ||::.
  Fly   347 AVGNSQRATASTAMNDKSS----RSHSIFNIVLNLTDLSSDDGLSSDTDSSTASSLRQTRRSKIS 407

  Fly   314 IIDLGG-----CANRNGGLPLSGI---------GNILLAILSGQR--------------HPPHKD 350
            ::||.|     .:..||.....|:         |.::.|:...::              ..|:::
  Fly   408 LVDLAGSERISVSGSNGERIREGVSINKSLLTLGKVIAALADSRKAIANGPLGSGTPSTFVPYRE 472

  Fly   351 HPLTPLLKD------------CLAPITCHV--------------AIVAHVRPEQSYQDALSTIQI 389
            ..||.||::            .::|.:.|.              :||..|:..:|..|.:.. .:
  Fly   473 SVLTWLLRENLGGNSKTVMLATISPASIHADETLATLRYACKARSIVNRVKVNESPHDKIIR-DL 536

  Fly   390 ASRIHRLR------RRKHRVPMPLAVGLAQGLGGNGSSAGSGADPSSSEISADTVIYMGPNDDAT 448
            .:.:.||:      .|:.|            |.||.:      :|...:|..:|.:      |.|
  Fly   537 RAEVDRLKSLRNEYERQRR------------LSGNSN------NPVPRKIIIETSV------DET 577

  Fly   449 DGEHPPVYLPSLTAGDNRGVMSKALKGSGLEKPPSKSASNSPMMMKKAMAAEKAKKLPGSHTGSL 513
            :.|                    ||:....|:....|.:....|.|...|.::.|    |....|
  Fly   578 EVE--------------------ALRQQLAERERELSRAQKSWMEKLKEAEDQRK----SELRVL 618

  Fly   514 KRQAGAGACSSPMIPHEQPQ---IQAMGSPI-------PIPRHMVSKGSMVPSPKGSPMRRAHPG 568
            ||:..|...::     ||.|   :.....||       .:|:.:|..|      :|         
  Fly   619 KRRGLALELTA-----EQKQACLVNLTADPILSGTLFYLLPQGLVRIG------RG--------- 663

  Fly   569 AALEQLEAGMRKITEEQWIDGPRVSRAKVAEARHLMREVNHVK-----------QCETWVDGPKS 622
                :|..|......:..:|||.|:      .:|.  .:.|.:           ..||:|:|...
  Fly   664 ----RLPGGSSSSQPDIVLDGPLVA------LQHC--SIEHERGGKLYVIPGSEDFETYVNGELL 716

  Fly   623 QSCRSLTACNLPAAGGSQ---------------TQGYGFMDAHKKTMIRQWVENQTTQVFQSTVS 672
            :..|.|...:....|||.               .....|..||::.:.:|      .|..:|.:.
  Fly   717 KDRRQLFHGDRLVIGGSHYFRISNPFCSQRGKADHPVDFQLAHQEILQKQ------EQQLRSELE 775

  Fly   673 ASNSPTALHWKLSQLK-QKSLDLPDR------PAFNPEPSLDLNQPCFESLPLLDPA--PPDGDE 728
            |..  .|...|:.|.: |.:.|..:|      ..|..:.:.::.:...::|.|....  .|...|
  Fly   776 AEK--RAALTKIEQERAQHARDFEERLQCLELEQFKYKCNSEMLETERQALALAQQQEHTPLRHE 838

  Fly   729 DEDSGPSEVPPALPLLDDPLGSRDISQDNLHRMLSRHVSREQLHEAELVASRASSSHHPSQRSID 793
            |..|.|::....|              :::.|:: .:.|.|.||:.:|:...|:.    ..|.:|
  Fly   839 DAVSTPAQKSTIL--------------EDIQRIM-LNPSEESLHKTQLMVKEATQ----RCRQLD 884

  Fly   794 CGLQVTEEE------IART-----------------------MSRDRDHDPSAHPLSALSHCDNI 829
            ..|:..:.:      :.||                       :...||:......|:|.:...::
  Fly   885 LPLEFRQTQTPDEFGLLRTVILILDKQRGLKAEWPTARLGVWLDLVRDNAEQQEKLNATTIFQSV 949

  Fly   830 S-----FVSSFNMACESFSECGERARQQFDQLARLHEIFTSQLAMAEVTPSAALFRTDIGSVFSE 889
            .     ..:..|   |:.|:....:|           |..:..||.:|             :.::
  Fly   950 EVDWEPLDADLN---ETLSDTHNSSR-----------IALNLSAMKDV-------------LLNK 987

  Fly   890 PVYHFNVGQSSVCSEPAYRLTPSPPKQ------------PSHSP-SQGSLPSL 929
            |:.......||..:.|....||||..|            |...| ||.|..:|
  Fly   988 PLKRLLNASSSKSNTPRQTSTPSPGSQLVHFTKRLLTYDPEEIPESQSSFTTL 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14535NP_001285726.1 Motor_domain 44..394 CDD:277568 87/471 (18%)
nebNP_476817.1 KISc_KIF1A_KIF1B 119..525 CDD:276816 79/430 (18%)
KISc 120..525 CDD:214526 79/429 (18%)
Kinesin_assoc 524..657 CDD:292801 34/186 (18%)
FHA 634..740 CDD:238017 23/132 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24115
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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