Protein Alignment Rack1 and ATARCA

DIOPT Version :10

• Sequence 1: NP_477269.1
• Gene: Rack1 / 34070
• FlyBaseID: FBgn0020618
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_173248.1
• Gene: ATARCA / 838388
• AraportID: AT1G18080
• Length: 327
• Species: Arabidopsis thaliana
• Alignment Length: 325
• Identity: 206/325 - (63%)
• Similarity: 240/325 - (73%)
• Gaps: 13/325 - (4%)

  Fly     1 MSETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSH 65
            |:|.|.|:||:..|...||.|||...:.|.|:||||||::|:||||:| |..||..|:||.||||
plant     1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKD-DKAYGVAQRRLTGHSH 64

  Fly    66 FISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTI 130
            |:.||||||||.:|||||||..|||||||||.:||||.||||||||||||.|||||||.|||:||
plant    65 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 129

  Fly   131 KLWNTLAECKFTIQE--DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHN 193
            ||||||.|||:||.|  :||.|||||||||||...|.|||..||:|||||||:||||::...||.
plant   130 KLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT 194

  Fly   194 GYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPSIK 258
            ||::||.||||||||.|||||...|||||.:||.||:||.|.:|:||||||||||||.|....||
plant   195 GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIK 259

  Fly   259 IWDLACKKTVEELRPEVVSPTSKADQP----------QCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
            ||||..|..||:|:.::.:...|||..          .|.||.||.||.|||:||:|..||||.:
plant   260 IWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 324

  Fly   314  313
            plant   325  324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rack1	NP_477269.1	WD40	7..312	CDD:238121	202/316 (64%)
		WD40 repeat	18..62	CDD:293791	25/43 (58%)
		WD40 repeat	68..104	CDD:293791	28/35 (80%)
		WD40 repeat	109..145	CDD:293791	30/35 (86%)
		WD40 repeat	153..190	CDD:293791	25/36 (69%)
		WD40 repeat	196..232	CDD:293791	24/35 (69%)
		WD40 repeat	237..280	CDD:293791	24/42 (57%)
		WD40 repeat	287..311	CDD:293791	15/23 (65%)
ATARCA	NP_173248.1	WD40	7..322	CDD:238121	201/315 (64%)
		WD40 repeat	67..103	CDD:293791	28/35 (80%)
		WD40 repeat	108..144	CDD:293791	30/35 (86%)
		WD40 repeat	154..191	CDD:293791	25/36 (69%)
		WD40 repeat	197..233	CDD:293791	24/35 (69%)
		WD40 repeat	238..279	CDD:293791	24/40 (60%)
		WD40 repeat	298..322	CDD:293791	15/23 (65%)