| Sequence 1: | NP_001260218.1 | Gene: | Rack1 / 34070 | FlyBaseID: | FBgn0020618 | Length: | 318 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_570090.2 | Gene: | Rack1 / 83427 | RGDID: | 69229 | Length: | 317 | Species: | Rattus norvegicus |
| Alignment Length: | 315 | Identity: | 243/315 - (77%) |
|---|---|---|---|
| Similarity: | 275/315 - (87%) | Gaps: | 1/315 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSH 65
Fly 66 FISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTI 130
Fly 131 KLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGY 195
Fly 196 LNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPSIKIW 260
Fly 261 DLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVSV 315 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rack1 | NP_001260218.1 | WD40 | 7..312 | CDD:238121 | 238/304 (78%) |
| WD40 repeat | 18..62 | CDD:293791 | 32/43 (74%) | ||
| WD40 repeat | 68..104 | CDD:293791 | 28/35 (80%) | ||
| WD40 repeat | 109..145 | CDD:293791 | 30/35 (86%) | ||
| WD40 repeat | 153..190 | CDD:293791 | 32/36 (89%) | ||
| WD40 repeat | 196..232 | CDD:293791 | 29/35 (83%) | ||
| WD40 repeat | 237..280 | CDD:293791 | 31/42 (74%) | ||
| WD40 repeat | 287..311 | CDD:293791 | 18/23 (78%) | ||
| Rack1 | NP_570090.2 | WD40 | 7..311 | CDD:238121 | 237/303 (78%) |
| WD 1 | 13..44 | 23/30 (77%) | |||
| WD40 repeat | 18..61 | CDD:293791 | 31/42 (74%) | ||
| WD 2 | 61..91 | 23/29 (79%) | |||
| WD40 repeat | 67..103 | CDD:293791 | 27/35 (77%) | ||
| WD 3 | 103..133 | 27/29 (93%) | |||
| WD40 repeat | 108..144 | CDD:293791 | 31/35 (89%) | ||
| WD 4 | 146..178 | 24/31 (77%) | |||
| WD40 repeat | 152..189 | CDD:293791 | 32/36 (89%) | ||
| WD 5 | 190..220 | 23/29 (79%) | |||
| WD40 repeat | 195..231 | CDD:293791 | 29/35 (83%) | ||
| WD 6 | 231..260 | 23/28 (82%) | |||
| WD40 repeat | 236..279 | CDD:293791 | 32/42 (76%) | ||
| WD 7 | 281..311 | 22/29 (76%) | |||
| WD40 repeat | 286..310 | CDD:293791 | 18/23 (78%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166351858 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H4446 | |
| Inparanoid | 1 | 1.050 | 524 | 1.000 | Inparanoid score | I1201 |
| OMA | 1 | 1.010 | - | - | QHG53895 | |
| OrthoDB | 1 | 1.010 | - | - | D372857at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003692 | |
| OrthoInspector | 1 | 1.000 | - | - | oto96051 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101640 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR19868 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X2556 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 13 | 12.910 | |||||