DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rack1 and Wdr31

DIOPT Version :10

Sequence 1:NP_477269.1 Gene:Rack1 / 34070 FlyBaseID:FBgn0020618 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_076086.1 Gene:Wdr31 / 71354 MGIID:1918604 Length:367 Species:Mus musculus


Alignment Length:278 Identity:76/278 - (27%)
Similarity:116/278 - (41%) Gaps:41/278 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HNGWVTQIATNPKDPDTIISASRDKTLIV--WKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDG 76
            |...|:.|||  .:.|..||..:|||.:.  ||.        |...||..||...|:.:......
Mouse    61 HVDTVSVIAT--LNSDLCISGGKDKTAVAYNWKT--------GRMVKRFTGHEREITKIACIPKA 115

  Fly    77 NYALSGSWDQTLRLWDLAAGKTTR-RFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNT-LAEC 139
            |...|.|.|:|:.:|||......| :..||...|..:|.|.|:.|:.:||||.::.||:. ..:|
Mouse   116 NQFFSASRDKTVLMWDLQGSSHPRQQLSGHAMVVTGLAVSPDSSQLCTGSRDNSLLLWDVGTGQC 180

  Fly   140 --KFTIQED--GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVT 200
              :.::..:  .|..||.        |.|.||....|:|:::|:....::.:.............
Mouse   181 VERASVSRNLVTHLCWVP--------SEPYIVQTSEDKTIRLWDSRGLQMAHMFPTKQHIQTHCE 237

  Fly   201 VSPDGSLCTS-----GGKDSKALLWDLNDGKNLYT--LEHNDIINALCFSPNRYWL-----CVAY 253
            ||.||..|.|     ||:..:|.||||...::...  ..|...:.:..|.|....|     ..|:
Mouse   238 VSVDGHTCISCSSGFGGEGCEATLWDLRQTRDRMCEYKGHFQTVASCVFLPKSTALMPMIATSAH 302

  Fly   254 GPSIKIWDL---ACKKTV 268
            ...:|||:.   ||..|:
Mouse   303 DSKVKIWNQDTGACLSTL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rack1NP_477269.1 WD40 7..312 CDD:238121 76/278 (27%)
WD40 repeat 18..62 CDD:293791 15/45 (33%)
WD40 repeat 68..104 CDD:293791 9/36 (25%)
WD40 repeat 109..145 CDD:293791 12/38 (32%)
WD40 repeat 153..190 CDD:293791 7/36 (19%)
WD40 repeat 196..232 CDD:293791 13/42 (31%)
WD40 repeat 237..280 CDD:293791 10/40 (25%)
WD40 repeat 287..311 CDD:293791
Wdr31NP_076086.1 WD40 <48..354 CDD:441893 76/278 (27%)
WD 1 60..100 16/48 (33%)
WD40 repeat 65..101 CDD:293791 15/45 (33%)
WD 2 101..140 11/38 (29%)
WD40 repeat 107..144 CDD:293791 9/36 (25%)
WD 3 144..183 14/38 (37%)
WD40 repeat 149..184 CDD:293791 12/34 (35%)
WD 4 186..225 10/46 (22%)
WD40 repeat 192..227 CDD:293791 10/42 (24%)
WD40 repeat 234..275 CDD:293791 13/40 (33%)
WD 5 276..319 10/42 (24%)
WD40 repeat 285..321 CDD:293791 10/36 (28%)
Blue background indicates that the domain is not in the aligned region.

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