DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rack1 and WSB1

DIOPT Version :9

Sequence 1:NP_001260218.1 Gene:Rack1 / 34070 FlyBaseID:FBgn0020618 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_056441.6 Gene:WSB1 / 26118 HGNCID:19221 Length:421 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rack1NP_001260218.1 WD40 7..312 CDD:238121
WD40 repeat 18..62 CDD:293791
WD40 repeat 68..104 CDD:293791
WD40 repeat 109..145 CDD:293791
WD40 repeat 153..190 CDD:293791
WD40 repeat 196..232 CDD:293791
WD40 repeat 237..280 CDD:293791
WD40 repeat 287..311 CDD:293791
WSB1NP_056441.6 WD 1 32..71
WD40 38..382 CDD:225201
WD40 repeat 59..105 CDD:293791
WD 2 124..165
WD40 135..388 CDD:238121
WD 3 168..208
WD40 repeat 174..212 CDD:293791
WD 4 212..251
WD40 repeat 217..253 CDD:293791
WD 5 254..293
WD40 repeat 261..299 CDD:293791
WD 6 309..346
WD40 repeat 314..353 CDD:293791
SOCS_WSB1_SWIP1 382..421 CDD:239715
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D805365at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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