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Protein Alignment CG7115 and Ppm1h

DIOPT Version :9

Sequence 1:	NP_001260216.1	Gene:	CG7115 / 34069	FlyBaseID:	FBgn0027515	Length:	524	Species:	Drosophila melanogaster
Sequence 2:	NP_001258008.1	Gene:	Ppm1h / 314897	RGDID:	1309528	Length:	513	Species:	Rattus norvegicus

Alignment Length:	436	Identity:	104/436 - (23%)
Similarity:	167/436 - (38%)	Gaps:	147/436 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly   129 IEENINNNTGIS--FFAVFDGHGGEFAADFAKDVLVKNIYNKIIEMSKLLKTEGNSGDYDKSPYL 191
            ::|| :.:.|||  ::::||||.|..||..|..:|..:|..::.::.::||
  Rat   132 LKEN-SESEGISCHYWSLFDGHAGSGAAVVASRLLQHHITQQLQDIVEILK-------------- 181

  Fly   192 ARKQSRKDANKENTEPTAGVMRKDSLRKAHSTTADCSAIKQKTTEASIADIYTVQLNSAMRASGN 256
                     |.....||                  |...:.::|.|     :...|..|....|.
  Rat   182 ---------NSAILPPT------------------CLGEEPESTPA-----HGRTLTRAASLRGG 214

  Fly   257 LGAAKDSFLNNNNNGQNGAANAPPPNYEAKCYIEHGRINFGKLITDEIMSADYKLVEQAKRATNI 321
            :||.             |:.:.||..:..:..|.|..:..|.| .......|.: :|:.:.|.||
  Rat   215 VGAP-------------GSPSTPPTRFFTEKKIPHECLVIGAL-ESAFKEMDLQ-IERERSAYNI 264

  Fly   322 A-GTTALIAIVQGSKLIVANVGDSRGVMYDWRGIAIPLSFDHKPQQVRER--------------- 370
            : |.||||.:....||.|||.||||.::.. .|..||:|.:..|:..|:|
  Rat   265 SGGCTALIVVCLLGKLYVANAGDSRAIIIR-NGEIIPMSSEFTPETERQRLQYLAFMQPHLLGNE 328

  Fly   371 -------KRIH--DAGGFIAFRGV----W----------------------RVAGVLATSRALGD 400
                   :|:.  :.|..:.:|..    |                      ||...:..:|.|||
  Rat   329 FTHLEFPRRVQRKELGKKMLYRDFNMTGWAYKTIEDDDLKFPLIYGEGKKARVMATIGVTRGLGD 393

  Fly   401 YPLK--DKNLVI-----ATPDILTFELNDHK---PHFLILASDGLWDTFSNEEACTFALEHLK-- 453
            :.||  |.|:.|     :.|::..::|:.::   ...||||:|||||..||||......:.|.
  Rat   394 HDLKVHDSNIYIKPFLSSAPEVRVYDLSKYEHGADDVLILATDGLWDVLSNEEVAEAITQFLPNC 458

  Fly   454 EPD------FGAKSLAMESY-------------KRGSVDNITVLVI 480
            :||      ..|:.|.|.:.             :.||.|:|:|.||
  Rat   459 DPDDPHRYTLAAQDLVMRARGVLKDRGWRISNDRLGSGDDISVYVI 504

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.