DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7115 and Ppm1d

DIOPT Version :9

Sequence 1:NP_001260216.1 Gene:CG7115 / 34069 FlyBaseID:FBgn0027515 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001099295.2 Gene:Ppm1d / 287585 RGDID:1305460 Length:598 Species:Rattus norvegicus


Alignment Length:475 Identity:106/475 - (22%)
Similarity:160/475 - (33%) Gaps:209/475 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 TGISFFAVFDGHGGEFAADFAKDVLVKNIYNKIIEMSKLLKTEGNSGDYDKSPYLARKQSRKDAN 201
            :.::||||.|||||..||.||::.|...|                               :|...
  Rat    89 SSVAFFAVCDGHGGREAAQFAREHLWGFI-------------------------------KKQKG 122

  Fly   202 KENTEPTAGVMRKDSLRKAHSTTADCSAIKQKTTEASIADIYTVQLNSAMRASGNLGAAKDSFLN 266
            ..::|| |.|               |:||::                              .|| 
  Rat   123 FTSSEP-AKV---------------CAAIRK------------------------------GFL- 140

  Fly   267 NNNNGQNGAANAPPPNYEAKCYIEHGRINFGKLITDEIMSADYKLVEQAKRATNI---AGTTALI 328
                               .|::...:                ||.|..|..|.:   :||||.:
  Rat   141 -------------------ACHLAMWK----------------KLAEWPKTMTGLPSTSGTTASV 170

  Fly   329 AIVQGSKLIVANVGDSRGVMYDWRGI----------AIPLSFDHKPQQVRERKRIHDAGGFI--- 380
            .|::|.|:.||:||||..|:    ||          |:.::.||||:..:||:||...||.:   
  Rat   171 VIIRGMKMYVAHVGDSGVVL----GIQDDPKDDFVRAVEVTQDHKPELPKERERIEGLGGSVMNK 231

  Fly   381 --AFRGVWRVAGV-----------------LATSRALGDYPLKD----KNLVIATPDILTFELND 422
              ..|.||:...:                 ||.:|||||....|    |.:|...||.....|:.
  Rat   232 SGVNRVVWKRPRLTHSGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGKFVVSPEPDTSVHTLDP 296

  Fly   423 HKPHFLILASDGLWDTFSNEEACTFALEHLKEPDF--------GAKSLAMESYKRG-----SVDN 474
            .|..::||.|||||:....::|.:...:. :|..:        .||.|...:..|.     ..||
  Rat   297 QKHKYIILGSDGLWNMVPPQDAISMCQDQ-EEKKYLMGEQGQSCAKMLVNRALGRWRQRMLRADN 360

  Fly   475 ITVLVIVFKNDVYKIGSSAGKAGEESLKV-------------------PAKSQPV---------- 510
            .:.:||....:|...|:.   ..|:.|.:                   |:.:.||          
  Rat   361 TSAIVICISPEVDNQGNF---TNEDELFLNLTDSPTYNSQETCVMTPSPSSTPPVKSLEEDPWPR 422

  Fly   511 ------APAVVQRSNSIKTK 524
                  .||:| |||:...|
  Rat   423 LNSKDHIPALV-RSNAFSEK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7115NP_001260216.1 PP2Cc 111..482 CDD:238083 92/396 (23%)
Ppm1dNP_001099295.2 PP2C 84..361 CDD:278884 89/389 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.