DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB1 and Ntn4

DIOPT Version :9

Sequence 1:NP_476618.1 Gene:LanB1 / 34068 FlyBaseID:FBgn0261800 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_067295.2 Gene:Ntn4 / 57764 MGIID:1888978 Length:628 Species:Mus musculus


Alignment Length:599 Identity:211/599 - (35%)
Similarity:288/599 - (48%) Gaps:106/599 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 CERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQD-----KKCFLCD-TREETKHDP 107
            ||: :|.|..|||.:||  :|.|.:.||.::.|.||..|...|     .||..|: ......|.|
Mouse    30 CEK-ACNPRMGNLALGR--KLRADTMCGQNATELFCFYSENADLTCRQPKCDKCNAAHSHLAHPP 91

  Fly   108 Y----KNHRIGQIIYKTKPGTNIPTWWQSENGKENATIQLDLEAEFHFTHLIITFTTFRPAAMYI 168
            .    .:.|..:            |||||........|||||||||:|||||:.|.:.|||||.:
Mouse    92 SAMADSSFRFPR------------TWWQSAEDVHREKIQLDLEAEFYFTHLIMVFKSPRPAAMVL 144

  Fly   169 ERSFDFGQTWHIYRYFAYDCKESFPGVPTVLENITDVMCTSRYSNVEPSRNGEVIFRVLPPNINV 233
            :||.|||:||..|:|||.:|..:|.....|::.  ..:|||||||..|...||||||.|.|..::
Mouse   145 DRSQDFGKTWKPYKYFATNCSATFGLEDDVVKK--GAICTSRYSNPFPCTGGEVIFRALSPPYDI 207

  Fly   234 TDPYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYYYGISNMVVRGSCSCYGHASQCL 298
            .:||:..||.|||:||||:::.|.......:.|...:.....:|.:.:.:|:|||.|.|||.|||
Mouse   208 ENPYSAKVQEQLKITNLRVRLLKRQSCPCQINDLNAKPHHFMHYAVYDFIVKGSCFCNGHADQCL 272

  Fly   299 PLD---PAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGK--KTNACKKCECN 358
            |::   |.  :|.....:|||||.|.|||.|.:|:.|...:||.||:.|.|:  ..|.|:.|:||
Mouse   273 PVEGFRPI--KAPGAFHVVHGRCMCKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTCKCN 335

  Fly   359 DHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQ 423
            .||.:||||..|:.|||..|||||:||.|||.||||:.|.|.||||..:..::...|:.|.|.|.
Mouse   336 GHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDACKACSCHPV 400

  Fly   424 GS-----SDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPC----T 479
            ||     |....||..|        |.|.||..|.|..|::|..|||..   ...||.||    :
Mouse   401 GSAILPFSSVTFCDPSN--------GDCPCKPGVAGPHCDRCMVGYWGF---GDYGCRPCDCAGS 454

  Fly   480 CNPL--------------------GTLNNS-------------GCVMRTGECKCKKYVTGKDCNQ 511
            |:||                    .:::|.             ..:..:|:|:||:.|.|.....
Mouse   455 CDPLTGDCISSNADVDWYHEVPAFHSMHNKSEPSWEWEDEQGFSALRHSGKCECKEQVLGNPKAF 519

  Fly   512 C-MPETYGLSESPEGCSLCNCDAGGSY------------DNYCDVISGQCRCRPH-MTGRSCSQP 562
            | |..:|.|.     ..:.:....||:            .....::.|:....|. .|.|.|:.|
Mouse   520 CGMKYSYVLK-----IKILSAHDKGSHAEVNVKIKKVLKSTKLKILRGKRTLYPESWTNRGCTCP 579

  Fly   563 KQNYFIPLLPEVHE 576
            ..|..:..|...||
Mouse   580 ILNPGLEYLVAGHE 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB1NP_476618.1 Laminin_N 63..286 CDD:278484 87/232 (38%)
EGF_Lam 287..343 CDD:238012 28/58 (48%)
Laminin_EGF 355..415 CDD:278482 33/59 (56%)
Laminin_EGF 418..475 CDD:278482 20/61 (33%)
EGF_Lam 477..526 CDD:238012 16/86 (19%)
EGF_Lam 529..567 CDD:214543 9/50 (18%)
EGF_Lam 789..834 CDD:214543
Laminin_EGF 837..885 CDD:278482
Laminin_EGF 883..930 CDD:278482
Laminin_EGF 933..988 CDD:278482
Laminin_EGF 991..1043 CDD:278482
Laminin_EGF 1043..1091 CDD:278482
Laminin_EGF 1094..1142 CDD:278482
Laminin_EGF 1142..1190 CDD:278482
COG6 1212..>1398 CDD:303003
TelA 1439..1782 CDD:226371
ApoLp-III_like 1545..1702 CDD:304399
Ntn4NP_067295.2 Laminin_N 43..260 CDD:278484 87/232 (38%)
EGF_Lam 261..320 CDD:238012 28/60 (47%)
Laminin_EGF 332..392 CDD:278482 33/59 (56%)
Laminin_EGF 395..449 CDD:278482 22/64 (34%)
NTR_netrin-4_like 517..626 CDD:239633 16/82 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0994
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10574
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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