Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001030158.1 | Gene: | lama1 / 569971 | ZFINID: | ZDB-GENE-060118-1 | Length: | 3075 | Species: | Danio rerio |
Alignment Length: | 2159 | Identity: | 523/2159 - (24%) |
---|---|---|---|
Similarity: | 796/2159 - (36%) | Gaps: | 651/2159 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLELRLIVVIVLALLSWQWDPVDSQRPPQHGRRDRPKYPPNKFIKTHPCERSSCYPATGNLLIGR 65
Fly 66 ENRLTASSTCGLHSPERFC-ILSH-----LQDKKCFLCDTREETKHDPYKNHRIGQIIYKTKPGT 124
Fly 125 NIPTWWQS---ENGKEN--ATIQLDLEAEFHFTHLII-TFTTFRPAAMYIERSFDFG---QTWHI 180
Fly 181 YRYFAYDCKESF---PGV-PTVLENITDVMCTSRYSNVEPSRNGEVIFRVLPPNINVTDPYAEHV 241
Fly 242 QNQLKMTN---LRIQMTKLHKLGDNLLDSRLENEE--------KYYYGISNMVVRGSCSCYGHAS 295
Fly 296 QCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCECNDH 360
Fly 361 AVSCHFDEAVF-------TASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPC 418
Fly 419 DCDPQGSSDDGIC---DSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTC 480
Fly 481 NPLGTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSES-PEGCSLCNCDAGGSYDNYCDVI 544
Fly 545 SGQCRC----------------RPHMTGRSCSQPKQNYFIPLLPEVHEAEVVDECISYGANGNCS 593
Fly 594 LVAETPDGSFTGIGFTRVPE---NSELVFTVGDIPRSMPYDAVIRYQSTSRGDWENAFITLVRPD 655
Fly 656 QVDPEGGCGELAAATSSETRIPFSLPDRSRQVV-ALNEVCLEAGKVYKFRIYFERKRHDVDSPTA 719
Fly 720 TILVDSLTLIPRIDVTPIFQGSVLADIRKKDYEKYNCKSSLYDMNYKSDPKCQNLDNILSVFVHD 784
Fly 785 GASMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYGFGPEGCKACDCNSIGSKDKYC 849
Fly 850 DLITGQCQCVPNTYGRECNQCQPGYWNFPECRVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSC 914
Fly 915 LDGYYGNPLFGSEIGCRPCRCPETVASGLAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFF 979
Fly 980 GNP-DNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDALQQ-NCQQ 1042
Fly 1043 CECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGAL----- 1102
Fly 1103 ---------------------------------------HEQCNSYTGQCQCKPGFGGRACNQCQ 1128
Fly 1129 AHYWGNPN-EKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQFPHCSPC--- 1189
Fly 1190 ---------------------GEC-------------FNNWDLILSALEDA-------------- 1206
Fly 1207 -TTATILRAKEIKQVGATGAYTSEFSELDKKLQHIRNLLQNTSVS----LVDIEKLDYETQSL-- 1264
Fly 1265 ------------RDQLQASHGRLSETEQNLDDIYNSLSLSGVELESLQ-------NHSR-LVQQL 1309
Fly 1310 SKELKENGIQLQESNIEGALNLTRHAYERVSNLSTLKDEA------NELASNTD----------- 1357
Fly 1358 RNCKRVENLSNKIQAEADDLANNN---KLIE-------------------DYRAELTSLT----- 1395
Fly 1396 ---------------SQIPELNNQVC-----GKPGDPCD-----------------SLCG----- 1418
Fly 1419 ----------GAG---CGHC-----------------------GG---FLSCEHGAKTHSEEALK 1444
Fly 1445 VAKDAETAITSKK--------DQADQTIRALTQAKLNASEAYEKA----KRGFEQSERYLNQTNA 1497
Fly 1498 NIKLAENLFIALNNFQE-------------NKTASPSESKELAQKTLDL------------DLKL 1537
Fly 1538 EPEEIETLGDQINRAVSSLKNVEAIIYRTKPDLDRVN----------NLQSIANATKEKADKI-- 1590
Fly 1591 -------------LDSANSVVESLAAADESQGKAKDAIQQANSNIELAGQD-----------LEK 1631
Fly 1632 IDEETYSAEAPANNTAQQVEKLAKKVQKL---QNNIMKNDRDAKEITKEAGSVKLEAMRARGEAN 1693
Fly 1694 NLQSATSATNQTLTDRASRSENARERAKQLLQRASKLTVDTNAKLKDLNDLQTVY-LNKNQQLLR 1757
Fly 1758 LQAEIGPLNKELNE 1771 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 66/252 (26%) |
EGF_Lam | 287..343 | CDD:238012 | 21/55 (38%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 23/66 (35%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 18/59 (31%) | ||
EGF_Lam | 477..526 | CDD:238012 | 19/49 (39%) | ||
EGF_Lam | 529..567 | CDD:214543 | 9/53 (17%) | ||
EGF_Lam | 789..834 | CDD:214543 | 11/44 (25%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 4/47 (9%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 22/46 (48%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 21/55 (38%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 30/52 (58%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 22/47 (47%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 20/92 (22%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 21/71 (30%) | ||
COG6 | 1212..>1398 | CDD:303003 | 51/270 (19%) | ||
TelA | 1439..1782 | CDD:226371 | 74/410 (18%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 33/195 (17%) | ||
lama1 | NP_001030158.1 | LamNT | 25..275 | CDD:214532 | 73/290 (25%) |
EGF_Lam | 277..324 | CDD:238012 | 22/56 (39%) | ||
EGF_Lam | <364..390 | CDD:238012 | 14/25 (56%) | ||
Laminin_EGF | 404..463 | CDD:278482 | 20/64 (31%) | ||
Laminin_EGF | 461..506 | CDD:278482 | 19/48 (40%) | ||
Laminin_B | 571..699 | CDD:278481 | 34/180 (19%) | ||
EGF_Lam | 744..792 | CDD:238012 | 23/70 (33%) | ||
Laminin_EGF | 809..849 | CDD:278482 | 15/39 (38%) | ||
EGF_Lam | 851..903 | CDD:238012 | 28/51 (55%) | ||
Laminin_EGF | 905..951 | CDD:278482 | 22/47 (47%) | ||
Laminin_EGF | 954..1001 | CDD:278482 | 5/46 (11%) | ||
EGF_Lam | 1000..1045 | CDD:238012 | 14/44 (32%) | ||
Laminin_EGF | 1047..1095 | CDD:278482 | 21/48 (44%) | ||
Laminin_EGF | 1093..1149 | CDD:278482 | 8/55 (15%) | ||
Laminin_B | 1221..1346 | CDD:278481 | 28/139 (20%) | ||
EGF_Lam | <1365..1385 | CDD:238012 | 0/19 (0%) | ||
Laminin_EGF | 1407..1453 | CDD:278482 | 6/45 (13%) | ||
Laminin_EGF | 1456..1509 | CDD:278482 | 8/52 (15%) | ||
Laminin_EGF | 1512..>1549 | CDD:278482 | 9/42 (21%) | ||
Laminin_I | 1580..1842 | CDD:283627 | 48/277 (17%) | ||
Baculo_PEP_C | 1581..1711 | CDD:282382 | 24/132 (18%) | ||
Laminin_II | 2015..2148 | CDD:283628 | |||
LamG | 2133..2281 | CDD:238058 | |||
LamG | 2310..2466 | CDD:238058 | |||
LamG | 2491..2641 | CDD:238058 | |||
Laminin_G_1 | 2750..2877 | CDD:278483 | |||
LamG | 2897..3048 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |