Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011524280.1 | Gene: | LAMA3 / 3909 | HGNCID: | 6483 | Length: | 3342 | Species: | Homo sapiens |
Alignment Length: | 2616 | Identity: | 537/2616 - (20%) |
---|---|---|---|
Similarity: | 849/2616 - (32%) | Gaps: | 1100/2616 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 RPPQHGRRDRPKYPPNKF----IKTHP-CERS----------SCYPATGNLLIGRENRLTASSTC 75
Fly 76 GLH-------SPERFCIL---------SH-LQDKKCFLCDTREETKHDPYKNHRIGQIIYKTKPG 123
Fly 124 TNI----PTWWQS---ENGKE--NATIQLDLEAEFHFTHLIITFTTF-RPAAMYIERSFDFGQTW 178
Fly 179 HIYRYFAY---DCKESFPGVPTV-LENITDVMCTSRYSNVEPSRNGEVIFRVL---PPNINVTDP 236
Fly 237 YAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENE----EKYYYGISNMVVRGSCSCYGHASQC 297
Fly 298 LPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCECNDHAV 362
Fly 363 SCHFD------EAVFTASG-FVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDC 420
Fly 421 DP-------QG---------------------------------------SSDDGI--------- 430
Fly 431 --------------------------CDSLN--------------------ELEEGAVAGACHCK 449
Fly 450 AFVTGRRCNQCKDG--------------------------------------------YWNLQSD 470
Fly 471 NPEGCEPCTCNPLGTLNNSG-CVMRTGECKCKKYVTGKDCNQCMPETYGLSESPE-GCSLCNCDA 533
Fly 534 GGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYFIPLLPEVH--EAEVVDECISYGANGNCSLVA 596
Fly 597 ETPDGSFTGIGF----------------TRVPENSELVFTVGDIPRSMPYDAVIRYQS------- 638
Fly 639 ---TSRGDW-----------------ENAFITL-------------------------------- 651
Fly 652 ----------------------------------------------------------------- 651
Fly 652 --------VRPDQVD--------------PEGG-------------------------------- 662
Fly 663 ----------------------------------------------------------------- 662
Fly 663 ---------------CGELAAATSSETRI-------PF-SLPDRSRQVVAL----------NEVC 694
Fly 695 LEAGKV-----YKFRIYFERKRH------------------------------------------ 712
Fly 713 DVDSP--TATILV---DSLTLIPRIDVTPI--FQGSVLADIRKKDYEK-----YNC-KSSLYDMN 764
Fly 765 YKSDPK-----CQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAP 824
Fly 825 GTYGF---------------------------GPE---------------GCKACDCNSIGSKD- 846
Fly 847 --KYCDLITGQCQCVPNTYGRECNQCQPGYWNFPECRVCQCN---GHAATCDPIQGTCIDCQDST 906
Fly 907 TGYSCDSCLDG-YYGNPLFGSEIGCRPCRC----------------------------------- 935
Fly 936 ----------------PETVAS----------------------------GL------------- 943
Fly 944 ----------------------------------AHADGCSLDTRNNNM---------------- 958
Fly 959 -----------------------------LCHCQEGYSGSRCEICADNFFGNPDN--GGTCSKCE 992
Fly 993 CSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNNTIAHC 1057
Fly 1058 DRF-TGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGG 1121
Fly 1122 RACNQCQAHYWGNPNE---KCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQF 1183
Fly 1184 PHCSPCGECFNNWDLILSALEDATTATILRAKEIKQVGATGAYTSEFSELDKKLQHIRNLLQNTS 1248
Fly 1249 VSLVDIEKLDY-ETQS--LRDQLQASHGRLSETEQNLDDIYNSLSLSGVELESLQN----HSRLV 1306
Fly 1307 QQLSKELKENGIQLQESNIEGALNLTRHAYERVSNLSTLKDEANELAS--------NTDRNCKRV 1363
Fly 1364 EN-------------------LSNKI-------QAEADDLANN-NKLIEDYRAELTSLTSQIPEL 1401
Fly 1402 NNQVCGKPGDPCDSLCGGAGCGHCGGFLSCEHGAKTHSEEALKVAKDAETAITSKKDQADQTIRA 1466
Fly 1467 LTQAKLN------ASEAYEKAKRGFEQSERYLNQTNANI--KLAENLFIALNNFQENKTASPSES 1523
Fly 1524 KELAQKTLDLDLKLEPEEIETLGDQINRAVSSLKNVEAIIYRTKPDLDRVNNLQSIANATK---E 1585
Fly 1586 KADKILDSANSVVESLAAADESQGKAKDAIQQANSNIELAGQDLEKIDEETYSAEAPANNTAQQV 1650
Fly 1651 EKLAKKVQK--LQNN----------IMKNDRD-----AKEITKEAGSVKLEAMRARGEANNLQSA 1698
Fly 1699 TSATNQTLTDRASRSENARERAKQLLQRASKLTVDTNAKLKDL-NDLQTVYLNKNQQLLRLQAEI 1762
Fly 1763 GPLNKELNEHLIHIKE 1778 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 71/260 (27%) |
EGF_Lam | 287..343 | CDD:238012 | 18/55 (33%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 23/66 (35%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 28/201 (14%) | ||
EGF_Lam | 477..526 | CDD:238012 | 16/50 (32%) | ||
EGF_Lam | 529..567 | CDD:214543 | 16/37 (43%) | ||
EGF_Lam | 789..834 | CDD:214543 | 24/86 (28%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 20/50 (40%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 14/50 (28%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 18/227 (8%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 16/51 (31%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 10/48 (21%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 13/50 (26%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 10/47 (21%) | ||
COG6 | 1212..>1398 | CDD:303003 | 44/227 (19%) | ||
TelA | 1439..1782 | CDD:226371 | 82/369 (22%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 35/176 (20%) | ||
LAMA3 | XP_011524280.1 | LamNT | 46..297 | CDD:214532 | 75/270 (28%) |
EGF_Lam | 299..344 | CDD:238012 | 18/54 (33%) | ||
Laminin_EGF | 356..423 | CDD:278482 | 23/66 (35%) | ||
EGF_Lam | 425..465 | CDD:238012 | 7/39 (18%) | ||
Laminin_EGF | 491..538 | CDD:278482 | 2/46 (4%) | ||
EGF_Lam | 535..577 | CDD:238012 | 11/41 (27%) | ||
Laminin_EGF | 585..628 | CDD:278482 | 6/42 (14%) | ||
EGF_Lam | 631..682 | CDD:238012 | 17/50 (34%) | ||
EGF_Lam | 684..727 | CDD:238012 | 18/45 (40%) | ||
Laminin_EGF | 1275..1323 | CDD:278482 | 23/47 (49%) | ||
EGF_Lam | 1365..1410 | CDD:238012 | 16/44 (36%) | ||
EGF_Lam | 1413..1463 | CDD:238012 | 15/52 (29%) | ||
LamB | 1523..1650 | CDD:214597 | 7/126 (6%) | ||
EGF_Lam | 1695..1741 | CDD:238012 | 15/50 (30%) | ||
Laminin_EGF | 1743..1793 | CDD:278482 | 21/99 (21%) | ||
Laminin_I | 1854..2113 | CDD:283627 | 59/286 (21%) | ||
Laminin_I | 2071..2357 | CDD:283627 | 70/325 (22%) | ||
ApoLp-III_like | 2101..2265 | CDD:304399 | 38/191 (20%) | ||
Laminin_II | 2297..2425 | CDD:283628 | 26/109 (24%) | ||
LamG | 2444..2579 | CDD:214598 | |||
LamG | 2611..2751 | CDD:238058 | |||
LamG | 2778..2910 | CDD:238058 | |||
LamG | 3003..3143 | CDD:238058 | |||
LamG | 3167..3318 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |