Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
Alignment Length: | 2852 | Identity: | 576/2852 - (20%) |
---|---|---|---|
Similarity: | 868/2852 - (30%) | Gaps: | 1271/2852 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 PATGNLLIGRENRLTASSTCG--LHSPERFCIL------------SHLQDKKCFLCDTREETKHD 106
Fly 107 PYKNHRIGQIIYKTKPGTNIPTWWQS---ENGKE--NATIQLDLEAEFHFTHLIITF-TTFRPAA 165
Fly 166 MYIERSFDFGQTWHIYRYFA---YDCKESFPGVPTVLENIT---DVMCTSRYSNVEPSRNGEVIF 224
Fly 225 RVLPPNINVTDPYAEHV-QNQLKMTNLRIQMTKLHKLGDNLLDSRLEN---EEKYYYGISNMVVR 285
Fly 286 GSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTN 350
Fly 351 A----CKKCECNDHAVSCHFDEAVFTASG--------FVSGGVCDNCLHNTRGQHCEECMPYFYR 403
Fly 404 DP-----EQDITS---------------------------------------------------- 411
Fly 412 ----------------------------------------------------------------- 411
Fly 412 -------ER---------VCQPCDCDPQGSSDD-------------------------------- 428
Fly 429 -------------------GICDSLNEL------------------------------------- 437
Fly 438 ----------------EEG---------------------------AVAGACHCKAFVTGRRCNQ 459
Fly 460 CKDGYWNLQSDNPEGCEPCTCNPLGTLNN-SGCVMRTGECKCKKYVTGKDCNQCMPETYGL-SES 522
Fly 523 PEGCSLCNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYFIPLLPEVH------------ 575
Fly 576 --------------------------------------------------EAEVVDECISYGANG 590
Fly 591 NCS-------LVAETPDGSFTGIG------------------FTRV------------------- 611
Fly 612 -------------------------------------------------------PENSELVFTV 621
Fly 622 GDI----------------PRSMPYDAVIRYQSTSRGDWENAFITLVRPDQVDPEGG-------- 662
Fly 663 ---CGE----------------------LAAATSSETRIPF----SLPDRSRQVVALN--EVCL- 695
Fly 696 --EAGKVYKFR-------IYFERKRHD--------------------VDSPT-ATILVDSLTLIP 730
Fly 731 RIDVT----------------------------------------------------PIFQGSVL 743
Fly 744 ADIRKK-------------DY------EKY------------------NCKSSLYDMNYKSDPKC 771
Fly 772 QNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCK------------------------- 811
Fly 812 -----------------PNVVGRQCDQCAPGTYGFGPE-GCKACDCNSIG--SKDKYCDLITGQC 856
Fly 857 QCVPNTYGRECNQCQPGYWNFPEC----------------------------------------- 880
Fly 881 ----------------------------------------------------------------- 880
Fly 881 ----------------------------------------------------------------- 880
Fly 881 ---------------------RV------------------------------------------ 882
Fly 883 -------------------------------------------------------------CQCN 886
Fly 887 GHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHADGCSL 951
Fly 952 DTRNNNMLCHCQEGYSGSRCEICADNFFGNPDN-GGTCSKCECSNNVDLYDTGNCDRQTGACLKC 1015
Fly 1016 LYQTTGDHCELCKDGFFGDALQ-QNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCA 1079
Fly 1080 ENHWKIASGEGCESCNCDPIGALHE--QCNSYTGQCQCKPGFGGRACNQCQAHYWGNPNEKCQPC 1142
Fly 1143 ECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYI-----GQFPHCSPCGECFNNWDLIL-- 1200
Fly 1201 ---------SALEDATTATILRAKEIKQVGATGAYTSE----FSELDKKLQHIRNLLQNTSVSLV 1252
Fly 1253 DIEKLDYETQSLRDQLQASHGRLSETEQNLDDI--YNSLSLSGVEL---ESLQNHSRL------V 1306
Fly 1307 QQLSKELKE--------------------NGIQLQESNIEGALNLTRHAYERVS----------- 1340
Fly 1341 NLSTLKDEANELASNTD------------------RNCKRVENLSN---------KIQAE----- 1373
Fly 1374 -ADDLANNNKLIEDYRAELTSLTSQIPELNNQVCGKPGDPCDSLCGGAGCGHCGGFLSCEHGAKT 1437
Fly 1438 HSEEALKVAKDAETAITSKKDQADQ-----------------TIRALTQAKLNASEAYEKAKRGF 1485
Fly 1486 EQSERYLNQTNANIKLAENLFIALNNFQENKTASPSESKELAQKTLDLDLKLEPEEIETLGDQIN 1550
Fly 1551 RAVSSLKNVEAIIY-RTKPDLDRVNNLQSIANATKEKADKILDSANSVVESLAAADE------SQ 1608
Fly 1609 GKAKDAIQ--------------QANSNIELA---GQDLEKIDEETYSAEAPANNTAQQVEKLAKK 1656
Fly 1657 VQKLQNNIMKNDRDAKEITKEAGSVKLEAMRARGEANNLQSATSATNQTLTDRASRSENARERAK 1721
Fly 1722 QLLQRASKLTV--------------DTNAKLKDLNDLQTVYLNKNQQLLRLQAEIGP 1764 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 69/252 (27%) |
EGF_Lam | 287..343 | CDD:238012 | 18/55 (33%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 28/205 (14%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 30/187 (16%) | ||
EGF_Lam | 477..526 | CDD:238012 | 16/50 (32%) | ||
EGF_Lam | 529..567 | CDD:214543 | 20/37 (54%) | ||
EGF_Lam | 789..834 | CDD:214543 | 25/87 (29%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 24/344 (7%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 22/46 (48%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 20/55 (36%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 28/52 (54%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 22/47 (47%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 18/49 (37%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 14/52 (27%) | ||
COG6 | 1212..>1398 | CDD:303003 | 47/264 (18%) | ||
TelA | 1439..1782 | CDD:226371 | 71/381 (19%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 33/180 (18%) | ||
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 72/259 (28%) |
EGF_Lam | 272..>314 | CDD:238012 | 16/48 (33%) | ||
EGF_Lam | 332..389 | CDD:238012 | 22/57 (39%) | ||
EGF_Lam | 402..443 | CDD:238012 | 0/40 (0%) | ||
EGF_Lam | 448..491 | CDD:238012 | 0/42 (0%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 4/47 (9%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 6/47 (13%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 4/46 (9%) | ||
EGF_Lam | 631..673 | CDD:238012 | 2/41 (5%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 18/51 (35%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 16/49 (33%) | ||
EGF_Lam | 785..828 | CDD:238012 | 22/42 (52%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 10/134 (7%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 13/47 (28%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 10/36 (28%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 21/49 (43%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 0/47 (0%) | ||
LamB | 1632..1760 | CDD:214597 | 2/127 (2%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 0/25 (0%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 21/42 (50%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 18/48 (38%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 26/51 (51%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 23/49 (47%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 16/40 (40%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 13/33 (39%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 50/270 (19%) | ||
Tar | 2278..2662 | CDD:223910 | 77/443 (17%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 24/138 (17%) | ||
LamG | 2674..2843 | CDD:238058 | 13/81 (16%) | ||
LamG | 2878..3029 | CDD:238058 | |||
LamG | 3078..3205 | CDD:214598 | |||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45445159 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |