DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB1 and lama5

DIOPT Version :10

Sequence 1:NP_476618.1 Gene:LanB1 / 34068 FlyBaseID:FBgn0261800 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_001428968.1 Gene:lama5 / 321243 ZFINID:ZDB-GENE-030131-9823 Length:3665 Species:Danio rerio


Alignment Length:2922 Identity:587/2922 - (20%)
Similarity:899/2922 - (30%) Gaps:1304/2922 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LIVVIVLALLSWQWDPVDSQRPPQHGRRDRPKYPPNKFIKTHPCERSSCYPATGNLLIGRENRLT 70
            ::|.:.|.||:   ..:.:|..|.:|        .|.|         |.:|...||..|  .::|
Zfish    14 VLVFLPLLLLT---GTLTAQELPVNG--------VNGF---------SLHPPYFNLAEG--TKIT 56

  Fly    71 ASSTCGLHSPER-----FCIL----------SHLQDKKCFLCDTREETKHDPYKNHRIGQIIYKT 120
            |::|||:...|:     :|.|          ..:|.:.|.:|.:::..:..|..|         .
Zfish    57 ATATCGVDENEQPIQDLYCKLVGGPVSGDPSQTIQGQYCDICSSQDTNRAHPISN---------A 112

  Fly   121 KPGTNIPTWWQ----SENGKEN-ATIQLDLEAEFHFTHLIITFTTF-RPAAMYIERSFDFGQTWH 179
            ..||.  .|||    |.:.|.| ..:.|||...||..:::|.|... ||....:|||.|||:|:.
Zfish   113 IDGTE--RWWQSPPLSRSAKHNQVNVTLDLGQLFHVAYVLIKFANSPRPDLWVLERSIDFGKTYQ 175

  Fly   180 IYRYFA---YDCKESFPGVPTVLENI---TDVMCTSRYSNVEPSRNGEVIFRVL---PPNINVTD 235
            .:::||   .||.|.| |..|: |.|   .||:||:.||.:.|..|||::..::   |..:|.: 
Zfish   176 PWQFFASSKRDCIERF-GQRTI-ERIYHDDDVICTTEYSRIVPLENGEIVVSLVNGRPGAMNFS- 237

  Fly   236 PYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLEN---EEKYYYGISNMVVRGSCSCYGHASQC 297
             |:..::...|.||:|::..:.:.|..:|:...|.:   ..:|||.|.::.:.|.|.|.|||..|
Zfish   238 -YSPVLREFTKATNIRLRFLRTNTLLGHLMGKTLRDPTVTRRYYYSIKDISIGGRCVCNGHAEAC 301

  Fly   298 LPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCECNDHAV 362
            ...||      |:...:  :|:|.|||.|.:|:.|...||..|||||.....|.|:.|.|:.|:.
Zfish   302 NAQDP------NDPYKL--QCDCQHNTCGTSCDRCCPGFNQFPWKPATTYSANECEPCNCHRHSS 358

  Fly   363 SCHFDEAV------FTASG-FVSGGVCDNCLHNTRGQHCEECMPYFYRDPE-------------- 406
            .|::|..:      ....| :..||||..|.|:|.|.:||.|:|.:||.|:              
Zfish   359 ECYYDPEIDQRRSSLDMQGEYNGGGVCVECQHHTTGVNCERCIPGYYRSPDHPLESPFACSKCQC 423

  Fly   407 ---------QDITSERVCQP--------------------------------------CDCDPQG 424
                     :|.|....|:|                                      |:|:..|
Zfish   424 ESEFTEGTCEDRTGRCYCKPNYTGENCDQCAEGYEHFPECYQVLINGEVRPAGENIIDCECNAAG 488

  Fly   425 SSD----------------------------------------------DGICD----------- 432
            :..                                              ||.||           
Zfish   489 TEGNSCRPDPRTNTCVCKPEFTGEHCDTCSHGYFSINCQRCQCSGQGCLDGSCDAVTGQCVCRSG 553

  Fly   433 ----------------------------------------------------------------- 432
                                                                             
Zfish   554 FQGYSCEQCAPGYFNYPLCQYCGCSVVGSIPEMCDPAGRCLCRPEFTGPRCDQCQSGFHSYPNCQ 618

  Fly   433 ------------SLNELEE---------------------------------------------- 439
                        |.:||::                                              
Zfish   619 VCTCDPRTSLDSSCSELDQCNCRPNYSGPRCQQCAPGYYSYPSCTPCDCSVEGSRSSSCDPVSGQ 683

  Fly   440 ---------------------------------GAV-------AGACHCKAFVTGRRCNQCKDGY 464
                                             |:|       .|:|.|:.:|.|..|.:||..|
Zfish   684 CVCLPNIEGQRCDSCSPGSYGFPLCQLGTCNPAGSVHNDILPTVGSCVCRPYVEGVACERCKPLY 748

  Fly   465 WNLQSDNPEGCEPCTCNPLGTLNN-SGCVMRTGECKCKKYVTGKDCNQCMPETYGL-SESPEGCS 527
            |||..|...||..|.||..|||:. :.|..|||:|.||..|....||.|....:.| .:|..||.
Zfish   749 WNLSPDTIYGCSTCDCNTAGTLSEVAECTQRTGQCFCKPNVCSGTCNVCKDGFFNLQKDSYFGCQ 813

  Fly   528 LCNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYFIPLLP----EVHEAEVVD-ECISYG 587
            .|.||.|||....||...|:|||||::.|..|.||:.:::.|.|.    ||.:...:| ..:.:|
Zfish   814 GCQCDIGGSVGQACDERYGRCRCRPNVEGPKCKQPRPDHYFPDLHHMKFEVEDGTTMDGRPVRFG 878

  Fly   588 AN--------------------------------------------------------------- 589
            .|                                                               
Zfish   879 YNPLEFESFSWRGYAQMSPIQPRVLVEVVVGSPDLFHVVLHYVNRGGVDVTGQVSVIEDGRHVLC 943

  Fly   590 GNCS----LVAETPDGSFTGIGFTRVPENSEL--------VFTV--------------------- 621
            ||||    .:...|....|   |..||:||.:        .:||                     
Zfish   944 GNCSEQSKQIVFAPSSEPT---FVNVPQNSFVEPFVLNPGTWTVIIEAEGILLDYLVLLPSAYYE 1005

  Fly   622 ----------------------------------------------------------------- 621
                                                                             
Zfish  1006 APILQLQVTEPCSYSHTQDASQNCLQYMYLSLDEFPSISSNDASCRSDNHLPRPCHTEKITPRHP 1070

  Fly   622 ---------------GDIPRSMPYDAVIRYQS------------TSRGD---------------- 643
                           |.:|....|..|:.|.|            :|.|:                
Zfish  1071 SMAICSGNDISVGLRGRVPVPGEYVLVVEYASEDQAPQNLTVSVSSAGESTHQEQITLLHCKYSF 1135

  Fly   644 ------------------WENAFITLV-------------------------------------R 653
                              ..||.|.|:                                     .
Zfish  1136 LCRSVSVDDMKRVALFTISANAEIQLIAERSSFFLHKVFLIPRAQFTMEYLKPRVHCISTHGHFA 1200

  Fly   654 PD---------QVDPEGGCGELAAATSSETRIPFSLPDRS------------------------- 684
            ||         |..|:....:...|:|....|..|.||.|                         
Zfish  1201 PDSGSCIPSRFQNPPQSLVLKEGQASSVAEPILASAPDPSLYADRPMTSTPPTATDNTEHVLLDT 1265

  Fly   685 ---------------RQVVALN-----------EVCLEAGKVY---------------------K 702
                           |.|..|:           :|.:..|:::                     :
Zfish  1266 SQNAVVYSTRVHALGRYVFILHYHQPLHPTYNVQVFINGGRIWQGNVNASFCPHGYGCRSVVMSE 1330

  Fly   703 FRIYFERKRHDV-----DSPTATILVDSLTLIPRIDVTPIFQGSVLADIRKKDYEKY-NC-KSSL 760
            .:|..:...|:|     .....|:.:|.:.::|....:..|....|.|   |.|:.. || ::|.
Zfish  1331 NQIILDVTDHEVILTLRVPDRKTLWLDYVLVVPEGSYSSSFLSEELLD---KSYDFISNCGQNSF 1392

  Fly   761 YDMNYKSDPKCQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPG 825
            |.....:...|.:....||.|.::||..|.|:..|:.|..|||.||.|:|:|||:||.|.|||.|
Zfish  1393 YINPSSASAFCLSSAVSLSSFFNNGAVPCGCHEVGAESDTCESFGGQCRCRPNVIGRDCSQCATG 1457

  Fly   826 TYGF----------------------------------GPE--------GCKACDCNSIG--SKD 846
            .|||                                  .|:        ||:.|:|:..|  |.|
Zfish  1458 YYGFPNCRPCNCGSRLCEPVTGECICPPRTLQPDCVTCEPQTFGCHPLVGCEMCNCSRPGVTSMD 1522

  Fly   847 KYCDLITGQCQCVPNTYGRECNQCQPGYWNFPECR------------------------------ 881
            ..||...|||:|..|..||:|::|.||::.:|.||                              
Zfish  1523 ISCDTNNGQCRCRNNIVGRQCDRCSPGFYGYPNCRPCNCNEAGTEMNVCDSFTGRCLCKENVEGP 1587

  Fly   882 ----------------------------------------------------------------- 881
                                                                             
Zfish  1588 RCDQCKLGTFHLDPTNAKGCTKCFCFGATDRCHSSDKRRSEIMDMAGWVLLRSDRQEVPVSTYLD 1652

  Fly   882 ----------------------------------------------------------------- 881
                                                                             
Zfish  1653 QDLVEADLSDVPDVSQDLHWHAPQAYLGDKVSSYGGYLRYRLHTQTMRGDAFLMVETIRPDVILK 1717

  Fly   882 ----------------------------------------------------------------- 881
                                                                             
Zfish  1718 GNQMTLVYMEREYPSPEDPHEGIVHLVEESFRHAQTGNSVSREELMMVLVALESLQIRALHSQSA 1782

  Fly   882 -----------------------------------------------------------VCQCNG 887
                                                                       .|.|||
Zfish  1783 QSVSLRAAVLEVAENMPSGRHANNVEICLCPGNYLGDSCQQCAPGYYRDNKGLFLGKCVPCNCNG 1847

  Fly   888 HAATCDPIQGTCIDCQDSTTGYSCDSCLDGY-YGNPLFGSEIGCRPCRCPETVASGLAHADGCSL 951
            |:..|....|.|::|:.:|.|..|:.||.|: :.|.:.|..:.|..|.||..|||. ..|..|. 
Zfish  1848 HSDQCLDGSGICVNCRHNTAGNHCEKCLGGFHHNNTVDGHSVSCSSCPCPLQVASN-NFAIRCV- 1910

  Fly   952 DTRNNNMLCHCQEGYSGSRCEICADNFFGNP-DNGGTCSKCECSNNVD---LYDTGNCDRQTGAC 1012
             .:.|||.|.|..||:||:||.||..::||| ..|.||..|.|:.|.|   |:  .:|...||.|
Zfish  1911 -EKPNNMRCLCMPGYAGSKCERCAPGYYGNPVVIGSTCQPCNCNGNSDPNMLF--SDCHPLTGEC 1972

  Fly  1013 LKCLYQTTGDHCELCKDGFFGDAL-QQNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCD 1076
            ..|::.|.|.|||:|..||:|||: .:||.:|.|...||    ||||..||||.|.|.|.|.:||
Zfish  1973 QSCMHNTAGPHCEICAPGFYGDAITAKNCTRCNCSPCGT----AHCDSHTGQCHCKPGVVGAQCD 2033

  Fly  1077 QCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYWGNPNEKCQP 1141
            :|....:...|..||..|:||...||.:.|:...|.|.|:||..|..|:||...:|...:..|:.
Zfish  2034 RCEHGTFGFDSCTGCRKCDCDASAALVQACDPVNGACACQPGVNGPNCHQCAPGHWNYSSNGCRK 2098

  Fly  1142 CECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYI-----GQFPHCSPCGECFNNWDLILS 1201
            |||.  |.   :||..||.|.|..|:.|.:|:.|...:.     |...||.||..|      ::.
Zfish  2099 CECK--GG---RCDPRTGECRCTTGLTGKQCDTCLSQHSVPVQNGADMHCQPCDSC------VMV 2152

  Fly  1202 ALED-----------ATTATILRAK-----EIKQVGAT-----GAYTSEFSELDK---KLQHIRN 1242
            .|||           |...|.|.|.     ::.::.|:     .|.|:..|.|||   :...:..
Zfish  2153 LLEDLDRISHFYESVANQLTSLNASTFAWTQLNRLNASIADIANAITNYNSTLDKSRNRASVLEG 2217

  Fly  1243 LLQNTSVSLVDIEKLDYETQ----SLRDQLQASHGRLSE-------TEQNLDDIYNSLSLSGVEL 1296
            .|:.....:.|:||....||    :|.|.:.::|.|..|       ..:::.||...::      
Zfish  2218 ELEIIDSDIKDLEKKASVTQKKKDALEDNINSTHTRAQELFGFIKGIMRDVKDIIQQVN------ 2276

  Fly  1297 ESLQNHSRL------------VQQLSKELKENGIQLQESNIEGALNLTRHAYERVSN-------- 1341
            .:.||.:::            |:.:.::::..|...|::..:..|:...:..:||.|        
Zfish  2277 RTAQNETQVMDEKDLARKIAEVESMLRDMRFRGFDYQKNKAKNELDQANNLVDRVINEIANRTWN 2341

  Fly  1342 ------------------LSTLKDEANELASNTDR-------NCKRVENLSNKI----------- 1370
                              |..|:|..||..:||.:       |.|.:|:|..|:           
Zfish  2342 NEAVAENIRNKLKQFNEQLMDLRDAMNEAVNNTAQTVEANNINQKHLEDLQKKVNSLHEKYKEVV 2406

  Fly  1371 ---QAEADDLANNNKL---IEDYRAELTSLTSQIPELNNQVCGK-----PGDPCDSLCGGAGCGH 1424
               |...||:...|.|   ::|.:.:...|.:|:......:..|     |               
Zfish  2407 SQLQMAEDDVTQVNDLLSMLQDSKEDYEHLAAQLDGARQPLAEKVQKYAP--------------- 2456

  Fly  1425 CGGFLSCEHGAKTHSEEALKVAKDAETAIT-SKKDQADQTIRALTQAKLNASEAYEKAKRGFEQS 1488
            ....:.....|:.|:|...::|.:..:.|: |.:|.       ..|..||||.||........::
Zfish  2457 AANKIPLVEAAEKHAEMLEQLANNLSSLISGSNQDN-------FIQRALNASRAYTNIINSVLEA 2514

  Fly  1489 ERYLNQTNANIKLAENLFIALNNFQENKTASPSESKEL-AQKTLDLDLKLEPEEIETLGDQINRA 1552
            |     |.| :|..|...:||.|.::         |:| ||...   ||.:..|:....:::|.:
Zfish  2515 E-----TTA-LKANETASMALENIRD---------KDLPAQAAA---LKNQSTELLKSAEELNNS 2561

  Fly  1553 VSSLKNVEAIIYRTKPDLDRVNNLQSIANATKEKADKILD----------SANSVVESLAAADES 1607
            ..||          ||.:|.:.  .|:.:|.|:|...:.|          |.:.:|.|::|    
Zfish  2562 SQSL----------KPRVDTIK--MSLLDAEKKKEKMLQDLKDIQNKLNVSRDDIVNSISA---- 2610

  Fly  1608 QGKAKDAIQQANSNI-ELAG--QDLEKIDEETYSAEAPANNTAQQVE------------------ 1651
               ||.|::|||:.: .::|  ..::|..||.......:|.|::.:.                  
Zfish  2611 ---AKSAVEQANNTVANVSGVLAPIQKQLEEWQKQYGDSNATSEDINKALNDANTSVAALSDTLP 2672

  Fly  1652 KLAKKVQKLQNNIMKNDRDAKEITKEAGSVKLEAMRARGEANNLQSATSATNQTLTDRASRSENA 1716
            ||.||:.:|.|...:....:..|.:    ::....:||..||.:..:.....::.....:.|..|
Zfish  2673 KLIKKLDRLHNTTFQPSNISDSIQR----IRQLIEQARNAANKVSVSMQFNGKSGVQVRTPSNVA 2733

  Fly  1717 RERAKQLLQRASKL---TVDTNAKLKDLNDLQTVYLNK------------NQQLLRLQAEIG 1763
            ...|...||...||   |:....:.:..|....:||..            |.:.||....:|
Zfish  2734 DLAAYSSLQMYIKLPSPTIKKKRQTEATNPQFVLYLGNRDSSKEYMAVTLNGKKLRWHFNVG 2795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB1NP_476618.1 Laminin_N 54..286 CDD:459653 75/264 (28%)
EGF_Lam 287..343 CDD:238012 21/55 (38%)
Laminin_EGF 355..415 CDD:395007 23/89 (26%)
Laminin_EGF 418..475 CDD:395007 25/276 (9%)
EGF_Lam 477..526 CDD:238012 19/50 (38%)
EGF_Lam 529..567 CDD:214543 18/37 (49%)
EGF_Lam 789..834 CDD:214543 25/86 (29%)
Laminin_EGF 837..885 CDD:395007 22/333 (7%)
Laminin_EGF 883..930 CDD:395007 17/47 (36%)
Laminin_EGF 933..988 CDD:395007 25/55 (45%)
Laminin_EGF 991..1035 CDD:395007 19/46 (41%)
Laminin_EGF 1043..1091 CDD:395007 20/47 (43%)
Laminin_EGF 1094..1142 CDD:395007 17/47 (36%)
Laminin_EGF 1142..1190 CDD:395007 18/52 (35%)
Mplasa_alph_rch 1228..>1771 CDD:275316 130/665 (20%)
cc_DmLAMB1-like_C 1717..1786 CDD:411973 13/62 (21%)
lama5NP_001428968.1 None

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