Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038954896.1 | Gene: | Lama2 / 309368 | RGDID: | 1308889 | Length: | 3121 | Species: | Rattus norvegicus |
Alignment Length: | 2368 | Identity: | 564/2368 - (23%) |
---|---|---|---|
Similarity: | 858/2368 - (36%) | Gaps: | 838/2368 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 LIVVIVLALLSWQWDPVDSQRPPQHGRRDRPKYPPNKFIKTHPCERSSCYPATGNLLIGRENRL- 69
Fly 70 TASSTCGLHSPERFC-ILSH-----LQDKKCFLCDTREETKHDPYKNHRIGQIIYKTKPGTNIPT 128
Fly 129 WWQS---ENGKE--NATIQLDLEAEFHFTHLII-TFTTFRPAAMYIERSFDFGQTWHIYRYFAYD 187
Fly 188 CKES------FP--GVPTVLENITDVMCTSRYSNVEPSRNGEVIFRVLPPNINVTDPYAEHVQNQ 244
Fly 245 LKMTN---LRIQMTKLHKLGDNLL-----DSRLEN---EEKYYYGISNMVVRGSCSCYGHASQCL 298
Fly 299 PLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKP-AFGKKTNACKKCECNDHAV 362
Fly 363 SCHFDEAVFTAS-------GFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDC 420
Fly 421 DPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGT 485
Fly 486 LNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGL-SESPEGCSLCNCDAGGSYDNYCDVISGQCR 549
Fly 550 CRPHMTGRSCSQPKQNYFIPLLPEVHEAEVVDECISYGANGNCSLVAETPDGSFTGIGFTRVPEN 614
Fly 615 SELVFTVGDIPRSMPYDAVIRYQSTSRGDWENAFITLVRPDQVDPEGGCGELAAATSSETRIPFS 679
Fly 680 LPDR---SRQVVALNEVCLEAGKVYKFRIYFERKRHDVDSPTATILVDSLTLI---PRIDVTPIF 738
Fly 739 QGSVLADIRKKDYEKYNCKSSLYDMNYKSDPKCQ--------NLDNILSVFVHD-------GASM 788
Fly 789 CNCN-----PTG-SLSKVCESNGGYCQCKPNVVGRQCDQCAP------GTYGFGPEGCKACDCNS 841
Fly 842 IGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNFPECRVCQCNGHAATCDPIQGTCIDCQDST 906
Fly 907 TGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHADGCSLDTRNNNMLC-HCQEGYSGSR 970
Fly 971 CEICADNFFGNPD-NGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGD 1034
Fly 1035 ALQ-QNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDP 1098
Fly 1099 IGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYW---------------GN------------PN 1136
Fly 1137 ---EK----------------CQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQ 1182
Fly 1183 FPHCSPCGECFNNWDLILSALEDATTATI----------------------------------LR 1213
Fly 1214 AKEIKQVGATGAY----TSEFSE--------------------LDKKLQHIRN---LLQNTSVSL 1251
Fly 1252 VDIEKLDYETQSLR--------------DQLQASHGRLSET-------EQNLDDIYNSLSLSGVE 1295
Fly 1296 LESLQNHSRL-----------------VQQLSKELKENG-------------------------- 1317
Fly 1318 ----------IQLQESNIEGALNLTRHAYERVSNL------------------------------ 1342
Fly 1343 -------------------STLKDEANELASNTDRN-----CKR--------VENLSNKIQAEAD 1375
Fly 1376 DL--ANNN-------KLIEDYRAELTSLTSQIPELNNQVC--------GKPGD------------ 1411
Fly 1412 ------PCDSLCG------GAGCGHCGGFLSCEHGAKTHSEEAL--------------------- 1443
Fly 1444 -------------KVAKDAETAITSKK-----DQADQTIRALTQAKLNA-----SEAYEKAKR-- 1483
Fly 1484 -GFEQSERYLNQTNAN----------------------IKLAENL----FIALNNFQENKTASPS 1521
Fly 1522 ESKELAQKTLDLDLKLEPEEIETLGDQINRAVSSLKNVEAII--------------------YRT 1566
Fly 1567 K---------------PDLDRVN-------------------NLQSIANATKEKADKILDSANSV 1597
Fly 1598 VESLAA----ADESQGKAKDAIQQANSNIELAGQDLE--KIDEETYSAEAPA------------- 1643
Fly 1644 ---------NNTA------------QQVEKLAKKVQKL-------------------QNNIMKND 1668
Fly 1669 RDAKEITKEAGSVK-----LEAMRARGEANNLQSA--TSATNQTL-------TDRASRSENARER 1719
Fly 1720 AKQ---------------------LLQRASKL---TVDTNAKLKD------LNDLQTVYLNKNQQ 1754
Fly 1755 LLRLQAEIGPLNKELNEHL----IHIKE 1778 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 71/254 (28%) |
EGF_Lam | 287..343 | CDD:238012 | 25/55 (45%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 23/66 (35%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 17/56 (30%) | ||
EGF_Lam | 477..526 | CDD:238012 | 18/49 (37%) | ||
EGF_Lam | 529..567 | CDD:214543 | 4/37 (11%) | ||
EGF_Lam | 789..834 | CDD:214543 | 17/56 (30%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 3/47 (6%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 21/46 (46%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 23/56 (41%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 27/52 (52%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 21/47 (45%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 22/93 (24%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 20/47 (43%) | ||
COG6 | 1212..>1398 | CDD:303003 | 57/357 (16%) | ||
TelA | 1439..1782 | CDD:226371 | 105/574 (18%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 45/276 (16%) | ||
Lama2 | XP_038954896.1 | Laminin_N | 39..284 | CDD:395009 | 75/262 (29%) |
EGF_Lam | 286..333 | CDD:238012 | 25/56 (45%) | ||
Laminin_EGF | 413..470 | CDD:395007 | 20/61 (33%) | ||
Laminin_EGF | 468..514 | CDD:395007 | 17/48 (35%) | ||
Laminin_B | 582..721 | CDD:395006 | 23/143 (16%) | ||
EGF_Lam | 755..804 | CDD:238012 | 22/58 (38%) | ||
EGF_Lam | 805..862 | CDD:238012 | 24/58 (41%) | ||
EGF_Lam | 863..915 | CDD:238012 | 25/51 (49%) | ||
EGF_Lam | 916..963 | CDD:238012 | 21/48 (44%) | ||
EGF_Lam | 966..1010 | CDD:214543 | 15/44 (34%) | ||
EGF_Lam | 1012..1057 | CDD:238012 | 6/44 (14%) | ||
Laminin_EGF | 1059..1107 | CDD:395007 | 21/49 (43%) | ||
Laminin_EGF | 1105..1162 | CDD:395007 | 11/66 (17%) | ||
LamB | 1228..1363 | CDD:214597 | 17/138 (12%) | ||
EGF_Lam | <1378..1406 | CDD:238012 | 0/27 (0%) | ||
Laminin_EGF | 1419..1465 | CDD:395007 | 8/45 (18%) | ||
Laminin_EGF | 1468..1523 | CDD:395007 | 13/59 (22%) | ||
EGF_Lam | 1526..>1563 | CDD:238012 | 11/39 (28%) | ||
Laminin_I | 1593..1851 | CDD:310534 | 50/265 (19%) | ||
SMC_prok_B | <1675..>2033 | CDD:274008 | 67/365 (18%) | ||
Laminin_II | 2036..2171 | CDD:368703 | 24/97 (25%) | ||
Laminin_G_1 | 2173..2313 | CDD:395008 | |||
Laminin_G_1 | 2367..2506 | CDD:395008 | |||
LamG | 2527..2689 | CDD:238058 | |||
Laminin_G_1 | 2792..2920 | CDD:395008 | |||
LamG | 2940..3092 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |