Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001094311.1 | Gene: | Lamb3 / 305078 | RGDID: | 1562668 | Length: | 1172 | Species: | Rattus norvegicus |
Alignment Length: | 1813 | Identity: | 385/1813 - (21%) |
---|---|---|---|
Similarity: | 578/1813 - (31%) | Gaps: | 720/1813 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 PNKFIKTHPCERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQDKKCFLCDTREETK 104
Fly 105 HDPYKNHRIGQIIYKTKPGTNIPTWWQSENGKENATIQLDLEAEFHFTHLIITFTTFRPAAMYIE 169
Fly 170 RSFDFGQTWHIYRYFAYDCKESFP----GVPTVLENITDVMCTSRYSNVEPS---RNGEVIFRVL 227
Fly 228 PPNINVTDPYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYYYGISNMVVRGSCSCYG 292
Fly 293 HASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCEC 357
Fly 358 NDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDP 422
Fly 423 QGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGTLN 487
Fly 488 NSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQCRCRP 552
Fly 553 HMTGRSCSQPKQNYFIPLLPEVHEAEVVDECISYGANGNCSLVAETPDGSFTGIGFTRVPENSEL 617
Fly 618 VFTVGDIPRSMPYDAVIRYQSTSRGDWENAFITLVRPDQVDPEGGCGELAAATSSETRIPFSLPD 682
Fly 683 RSRQVVALNEVCLEAGKVYKFRIYFERKRHDVDSPTATILVDSLTLIPRIDVTPIFQGSVLADIR 747
Fly 748 KKDYEKYNCKSSLYDMNYKSDPKCQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKP 812
Fly 813 NVVGRQCDQCAPGTYGFGPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNF 877
Fly 878 PECRVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASG 942
Fly 943 LAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDR 1007
Fly 1008 QTGACLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQG 1072
Fly 1073 VRCDQCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGGRACN-----QCQAHYW 1132
Fly 1133 GNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQFPHCSPCGECFNNWD 1197
Fly 1198 L-------ILSALEDAT----TATILRAKEIKQVGATGAYTSEFSELDKKLQHIRNLLQNTSVSL 1251
Fly 1252 VDIEKLDYETQSLRDQLQASHGRLSETEQ---------NLDDIYNSLSLSGVELESLQNHSRLVQ 1307
Fly 1308 QLSKELKENGIQLQESNIEGALNLTRHAYERVSNLSTLKDEANELASNTDRNCKRVENLSNKIQA 1372
Fly 1373 EADDLANNNKLIEDYRAELTSLTSQIPELNNQVCG-------KPGDPCDSLC---GGAGCG-HCG 1426
Fly 1427 GFLSCEHGAKTHSEEALKVAKDAETAITSKKDQADQTIRALTQAKLNASEAYEKAKRGFEQSERY 1491
Fly 1492 LNQTNANIKLAENLFIALNNFQENKTASPSESKELAQKTLDLDLKLEPEEIETLGDQINRAVSSL 1556
Fly 1557 KNVEAIIYRTKPDLDRVNNLQSIANATKEKADKILDSANSVVESLAAADESQGKAKDAIQQANSN 1621
Fly 1622 IELAGQDLEKIDEETYSAEAPANNTAQQV----EKLAKKVQKLQNNIMKNDRDAKEITKEAGSVK 1682
Fly 1683 LEAMRARGEANNLQSATSATNQT----------------LTDRASRSENARERAKQLLQ---RAS 1728
Fly 1729 KLTVDTNAKLKDLNDLQTVYLNKNQQLLRLQAEIGPLNKELNEHLIHIKERGSHYRQC 1786 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 73/229 (32%) |
EGF_Lam | 287..343 | CDD:238012 | 23/55 (42%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 27/59 (46%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 22/56 (39%) | ||
EGF_Lam | 477..526 | CDD:238012 | 9/48 (19%) | ||
EGF_Lam | 529..567 | CDD:214543 | 0/37 (0%) | ||
EGF_Lam | 789..834 | CDD:214543 | 0/44 (0%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 0/47 (0%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 0/46 (0%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 0/54 (0%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 5/51 (10%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 17/47 (36%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 22/52 (42%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 18/47 (38%) | ||
COG6 | 1212..>1398 | CDD:303003 | 42/194 (22%) | ||
TelA | 1439..1782 | CDD:226371 | 77/365 (21%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 38/160 (24%) | ||
Lamb3 | NP_001094311.1 | Laminin_N | 21..249 | CDD:295486 | 82/244 (34%) |
EGF_Lam | 250..305 | CDD:238012 | 23/55 (42%) | ||
Laminin_EGF | 317..367 | CDD:278482 | 27/49 (55%) | ||
Laminin_EGF | 380..429 | CDD:278482 | 22/56 (39%) | ||
EGF_Lam | 431..480 | CDD:238012 | 32/614 (5%) | ||
Laminin_EGF | 482..535 | CDD:278482 | 22/52 (42%) | ||
EGF_Lam | 535..572 | CDD:214543 | 14/36 (39%) | ||
SPEC | 909..1092 | CDD:295325 | 46/206 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0994 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |