| Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001100250.1 | Gene: | Ntn4 / 299737 | RGDID: | 1565947 | Length: | 630 | Species: | Rattus norvegicus |
| Alignment Length: | 607 | Identity: | 212/607 - (34%) |
|---|---|---|---|
| Similarity: | 290/607 - (47%) | Gaps: | 110/607 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 49 CERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQD-----KKCFLCD-TREETKHDP 107
Fly 108 Y----KNHRIGQIIYKTKPGTNIPTWWQSENGKENATIQLDLEAEFHFTHLIITFTTFRPAAMYI 168
Fly 169 ERSFDFGQTWHIYRYFAYDCKESFPGVPTVLENITDVMCTSRYSNVEPSRNGEVIFRVLPPNINV 233
Fly 234 TDPYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYYYGISNMVVRGSCSCYGHASQCL 298
Fly 299 PLD---PAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGK--KTNACKKCECN 358
Fly 359 DHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQ 423
Fly 424 GS-----SDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPC----T 479
Fly 480 CNPL--------------------GTLNNS-------------GCVMRTGECKCKKYVTGKDCNQ 511
Fly 512 C-MPETYGLSESPEGCSLCNCDAGGSYDNY------------CDVISGQCRCRPH-MTGRSCSQP 562
Fly 563 KQN----YFIPLLPEVHEAEVV 580 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 89/232 (38%) |
| EGF_Lam | 287..343 | CDD:238012 | 27/58 (47%) | ||
| Laminin_EGF | 355..415 | CDD:278482 | 33/59 (56%) | ||
| Laminin_EGF | 418..475 | CDD:278482 | 20/61 (33%) | ||
| EGF_Lam | 477..526 | CDD:238012 | 17/86 (20%) | ||
| EGF_Lam | 529..567 | CDD:214543 | 9/54 (17%) | ||
| EGF_Lam | 789..834 | CDD:214543 | |||
| Laminin_EGF | 837..885 | CDD:278482 | |||
| Laminin_EGF | 883..930 | CDD:278482 | |||
| Laminin_EGF | 933..988 | CDD:278482 | |||
| Laminin_EGF | 991..1043 | CDD:278482 | |||
| Laminin_EGF | 1043..1091 | CDD:278482 | |||
| Laminin_EGF | 1094..1142 | CDD:278482 | |||
| Laminin_EGF | 1142..1190 | CDD:278482 | |||
| COG6 | 1212..>1398 | CDD:303003 | |||
| TelA | 1439..1782 | CDD:226371 | |||
| ApoLp-III_like | 1545..1702 | CDD:304399 | |||
| Ntn4 | NP_001100250.1 | Laminin_N | 43..260 | CDD:278484 | 89/232 (38%) |
| EGF_Lam | 261..320 | CDD:238012 | 27/60 (45%) | ||
| Laminin_EGF | 332..392 | CDD:278482 | 33/59 (56%) | ||
| Laminin_EGF | 395..449 | CDD:278482 | 22/64 (34%) | ||
| NTR_netrin-4_like | 517..626 | CDD:239633 | 15/90 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR10574 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 3.010 | |||||