Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_005550.2 | Gene: | LAMA1 / 284217 | HGNCID: | 6481 | Length: | 3075 | Species: | Homo sapiens |
Alignment Length: | 2274 | Identity: | 537/2274 - (23%) |
---|---|---|---|
Similarity: | 840/2274 - (36%) | Gaps: | 789/2274 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 CERSSCYPATGNLLIGRENRLTASSTCGLHSPERFC-ILSH-----LQDKKCFLCDTREETKHDP 107
Fly 108 YKNHRIGQIIYKTKPGTNIPTWWQS---ENGKEN--ATIQLDLEAEFHFTHLIITFTTF-RPAAM 166
Fly 167 YIERSFDFGQTWHIYRYFAYDCKESFP--------GVPTVLENITDVMCTSRYSNVEPSRNGEVI 223
Fly 224 FRVL--PPNINVTDPYAEHVQNQLKMTN---LRIQMTKLHKLGDNLLD-SRLENEE-------KY 275
Fly 276 YYGISNMVVRGSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLP 340
Fly 341 WKPAFGKKTNACKKCECNDHAVSCHFDEAVF-------TASGFVSGGVCDNCLHNTRGQHCEECM 398
Fly 399 PYFYRDPEQDITSERVCQPCDCDPQGSSDDGIC---DSLNELEEGAVAGACHCKAFVTGRRCNQC 460
Fly 461 KDGYWNLQSDNPEGCEPCTCNPLGTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSE-SPE 524
Fly 525 GCSLCNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYFIPLLPEVHEAEVVDECISYGAN 589
Fly 590 GNCSLVAETPDGSFTGIGFTRVPENSELVFTVGDI--PRSMPYDAVIRYQSTSRGDWENAFITLV 652
Fly 653 RPDQVDPEGGCGELAAATSSETRIPFSLPDRSRQVVALNEVCLE---AGKVY----------KFR 704
Fly 705 IY--FERKRHDVDSPTATILVDSLTLIPRIDVTPIFQGSVLA------DIRKKDYEKYNCKSSLY 761
Fly 762 DMNYKSDPKCQNLD---------NILSVFV---HDGASMC---------NCNPTGSLSKVCESNG 805
Fly 806 GYCQCKPNVVGRQCDQCAPGTYGFGPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQC 870
Fly 871 QPGYWNFPECRVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRC 935
Fly 936 PETVASGLAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNPD-NGGTCSKCECSNNVDL 999
Fly 1000 YDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDAL-QQNCQQCECDFLGTNNTIAH------- 1056
Fly 1057 ----------------------------------------------------------------- 1056
Fly 1057 -------------------CDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGAL 1102
Fly 1103 HEQCNSYTGQCQCKPGFGGRACNQCQAHYWGNPNEKCQPCECDQFGAADFQCD---------RET 1158
Fly 1159 GNCVCHEGIGGYKCNECARGY--------IGQFPHCSPCGECFNNWDLILSALED--ATTATILR 1213
Fly 1214 AKEIKQV-------GAT-GAY--TSEFSELDKKL--QHIRNLLQNTSVSLVDIE----KLDYETQ 1262
Fly 1263 SLRDQLQASHGRL--SETEQNLDDIYNSLSLSGVELESLQNHSRLVQQ---LSKELKENGIQLQE 1322
Fly 1323 SNIEGALNLTRHAYERVSNLSTLKDEANELASNTD-----------RNCKRVENLSNKIQAEADD 1376
Fly 1377 LANNNK---LIED-------------------YRAELTSLTSQIP----------ELNNQV---- 1405
Fly 1406 --------CG--KPGDPCD-----------------SLCG------------------------- 1418
Fly 1419 ------GAGCGHC-----------GG--------------------------------------- 1427
Fly 1428 ---------FLSCE------------------------------HGAKTHSEEALKVAKDAETAI 1453
Fly 1454 TSKKD-----------QADQTIRALTQAKLNASEAYEKAKRGFEQSE--------------RYLN 1493
Fly 1494 QTNANIKLAENLFI---ALNNFQENKTA--SPSESKELAQ--KTLDLDLKL-------------E 1538
Fly 1539 P-EEIETLGDQINRAVS----SLKNVEAIIYRTKPDLDRVNNLQSIANAT-KEKADK-------- 1589
Fly 1590 ------------ILDSANSVVESLAAADE---------------------------SQGKAKDAI 1615
Fly 1616 QQANSN-------IELAGQDLEKIDEETYSAEAPA------NNTAQQVEKLAKKVQK-------L 1660
Fly 1661 QNNIMKNDRDA--------KE---ITKEAGSVKLEAMRARGEANNLQ----SATSATNQTLTDRA 1710
Fly 1711 SRSENARE---RAKQLLQRASKLTVDTNAKLKDLNDLQTVYLNKNQQLLRLQAEIGPLNKELNE 1771 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 71/255 (28%) |
EGF_Lam | 287..343 | CDD:238012 | 20/55 (36%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 25/66 (38%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 22/59 (37%) | ||
EGF_Lam | 477..526 | CDD:238012 | 21/49 (43%) | ||
EGF_Lam | 529..567 | CDD:214543 | 0/37 (0%) | ||
EGF_Lam | 789..834 | CDD:214543 | 8/53 (15%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 5/47 (11%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 22/46 (48%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 22/55 (40%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 30/52 (58%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 19/138 (14%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 23/47 (49%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 21/64 (33%) | ||
COG6 | 1212..>1398 | CDD:303003 | 46/239 (19%) | ||
TelA | 1439..1782 | CDD:226371 | 88/469 (19%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 41/243 (17%) | ||
LAMA1 | NP_005550.2 | LamNT | 16..268 | CDD:214532 | 76/269 (28%) |
EGF_Lam | 270..317 | CDD:238012 | 21/56 (38%) | ||
Laminin_EGF | 397..456 | CDD:278482 | 24/64 (38%) | ||
Laminin_EGF | 454..500 | CDD:278482 | 21/48 (44%) | ||
Laminin_B | 568..696 | CDD:278481 | 24/132 (18%) | ||
EGF_Lam | 741..789 | CDD:238012 | 23/58 (40%) | ||
Laminin_EGF | 791..846 | CDD:278482 | 22/55 (40%) | ||
EGF_Lam | 848..900 | CDD:238012 | 29/51 (57%) | ||
Laminin_EGF | 902..948 | CDD:278482 | 5/45 (11%) | ||
Laminin_EGF | 951..998 | CDD:278482 | 0/46 (0%) | ||
Laminin_EGF | 998..1041 | CDD:278482 | 14/42 (33%) | ||
Laminin_EGF | 1044..1092 | CDD:278482 | 25/49 (51%) | ||
Laminin_EGF | 1090..1147 | CDD:278482 | 18/60 (30%) | ||
LamB | 1213..1344 | CDD:214597 | 29/150 (19%) | ||
Laminin_EGF | 1403..1449 | CDD:278482 | 8/45 (18%) | ||
Laminin_EGF | 1452..1506 | CDD:278482 | 6/53 (11%) | ||
Laminin_EGF | 1509..1556 | CDD:278482 | 0/46 (0%) | ||
Laminin_I | 1567..1830 | CDD:283627 | 43/262 (16%) | ||
BAR | 1609..1841 | CDD:299863 | 42/231 (18%) | ||
Laminin_II | 2011..2145 | CDD:283628 | 16/52 (31%) | ||
LamG | 2141..2280 | CDD:214598 | |||
LamG | 2307..2463 | CDD:238058 | |||
Laminin_G_1 | 2514..2658 | CDD:278483 | |||
Laminin_G_1 | 2743..2872 | CDD:278483 | |||
LamG | 2892..3043 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |