DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB1 and Megf9

DIOPT Version :10

Sequence 1:NP_476618.1 Gene:LanB1 / 34068 FlyBaseID:FBgn0261800 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_766282.1 Gene:Megf9 / 230316 MGIID:1918264 Length:600 Species:Mus musculus


Alignment Length:259 Identity:89/259 - (34%)
Similarity:134/259 - (51%) Gaps:18/259 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   788 MCNCNPTGSLS-KVCESNGGYCQCKPNVVGRQCDQCAPGTYGFGPEG-CKACDCNSIGSKDKYCD 850
            ||||:..|||. |.|....|.|.|.....|..||.|..|.|.....| |..|.|:..|:....|:
Mouse   201 MCNCSEVGSLDVKRCNQTTGQCDCHVGYQGLHCDTCKEGFYLNHTVGLCLPCHCSPHGAVSILCN 265

  Fly   851 LITGQCQCVPNTYGRECNQCQPGYWNFPE--CRVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDS 913
             .:|.|||.....|..|::||.|::.|.:  |..||||..:.:||...|.|::||:::.|..|:.
Mouse   266 -SSGNCQCKVGVTGSMCDKCQDGHYGFGKTGCLPCQCNNRSDSCDVHTGACLNCQENSKGEHCEE 329

  Fly   914 CLDGYYGNPLFGSEIGCRPCRCPETVASGLAHADGCSLDTRNNNMLC-HCQEGYSGSRCEICADN 977
            |.:|:|.:|....:  |..|.|....::|     .|::::......| .|::||:|..|..|.:.
Mouse   330 CKEGFYPSPDAAKQ--CHRCPCSAVTSTG-----NCTIESGELEPTCDQCKDGYTGQNCNKCENG 387

  Fly   978 FFGNPDNGGTCSKCECSNNVDLYDTGN-CDRQTGACLKCLYQTTGDHCELCKDGFFGDALQQNC 1040
            :: |.|:  .|::|||..:||...|.. |..::|.|:.||:.|||..||.|.:|:..| ||:||
Mouse   388 YY-NSDS--ICTQCECHGHVDPIKTPKICKPESGECINCLHNTTGFWCEKCLEGYVRD-LQRNC 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB1NP_476618.1 Laminin_N 54..286 CDD:459653
EGF_Lam 287..343 CDD:238012
Laminin_EGF 355..415 CDD:395007
Laminin_EGF 418..475 CDD:395007
EGF_Lam 477..526 CDD:238012
EGF_Lam 529..567 CDD:214543
EGF_Lam 789..834 CDD:214543 18/46 (39%)
Laminin_EGF 837..885 CDD:395007 16/49 (33%)
Laminin_EGF 883..930 CDD:395007 16/46 (35%)
Laminin_EGF 933..988 CDD:395007 13/55 (24%)
Laminin_EGF 991..1035 CDD:395007 18/44 (41%)
Laminin_EGF 1043..1091 CDD:395007
Laminin_EGF 1094..1142 CDD:395007
Laminin_EGF 1142..1190 CDD:395007
Mplasa_alph_rch 1228..>1771 CDD:275316
cc_DmLAMB1-like_C 1717..1786 CDD:411973
Megf9NP_766282.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..199
PHA03247 <43..199 CDD:223021
Laminin_EGF 202..245 CDD:395007 17/42 (40%)
EGF_Lam 251..295 CDD:238012 14/44 (32%)
EGF_Lam 298..345 CDD:238012 16/48 (33%)
EGF_Lam 346..399 CDD:238012 14/60 (23%)
Laminin_EGF 398..442 CDD:395007 18/43 (42%)
Blue background indicates that the domain is not in the aligned region.

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