Sequence 1: | NP_476618.1 | Gene: | LanB1 / 34068 | FlyBaseID: | FBgn0261800 | Length: | 1788 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001264857.1 | Gene: | Lamb3 / 16780 | MGIID: | 99915 | Length: | 1168 | Species: | Mus musculus |
Alignment Length: | 1795 | Identity: | 389/1795 - (21%) |
---|---|---|---|
Similarity: | 590/1795 - (32%) | Gaps: | 705/1795 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 CERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQDKKCFLCDTREETKHDPYKNHRI 113
Fly 114 GQIIYKTKPGTNIPTWWQSENGKENATIQLDLEAEFHFTHLIITFTTFRPAAMYIERSFDFGQTW 178
Fly 179 HIYRYFAYDCKESFP----GVPTVLENITDVMCTSRYSNVEPS---RNGEVIFRVLPPNINVTDP 236
Fly 237 YAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYYYGISNMVVRGSCSCYGHASQCLPLD 301
Fly 302 PAFSQADNEDG-----MVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCECNDHA 361
Fly 362 VSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSS 426
Fly 427 DDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGTLNNSGC 491
Fly 492 VMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQCRCRPHMTG 556
Fly 557 RSCSQPKQNYFIPLLPEVHEAEVVDECISYGANGNCSLVAETPDGSFTGIGFTRVPENSELVFTV 621
Fly 622 GDIPRSMPYDAVIRYQSTSRGDWENAFITLVRPDQVDPEGGCGELAAATSSETRIPFSLPDRSRQ 686
Fly 687 VVALNEVCLEAGKVYKFRIYFERKRHDVDSPTATILVDSLTLIPRIDVTPIFQGSVLADIRKKDY 751
Fly 752 EKYNCKSSLYDMNYKSDPKCQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVG 816
Fly 817 RQCDQCAPGTYGFGPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNFPECR 881
Fly 882 VCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHA 946
Fly 947 DGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGA 1011
Fly 1012 CLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCD 1076
Fly 1077 QCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGGRACN-----QCQAHYWGNPN 1136
Fly 1137 EKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQFPHCSPCGECFNNWDLILS 1201
Fly 1202 ALEDATTATILR-AKEIKQVGATG----AYTSEFSELDKKLQHIRNLLQNTSVSLVDIEKLDYET 1261
Fly 1262 QSLRDQLQASHGRLSETEQNLDDIYNSLSLSGVELESL-QNHSRLVQQLSKELKENGIQLQESNI 1325
Fly 1326 EGALNLTRHAYERVSNLSTLKDEANELASNTDRNCKRVENLSNKIQAEADDLANNNKLIEDYRAE 1390
Fly 1391 LTSLTSQIPELNNQVCGK-------PGDPCDSLC---GGAGCG-HCGGFLSCEHGAKTHSEEALK 1444
Fly 1445 VAKDAETAITSKKDQADQTIRALTQAKLNASEAYEKAKRGFEQSERYLNQTNANIKLAEN----- 1504
Fly 1505 --LFIALNNFQENKTASPSESKELAQKTLDLDLKLEPEEIETLGDQINRAVSSLKNVEAIIYRTK 1567
Fly 1568 PDLDRVNNLQSIANATKEKADKILDSANSVVESLAAADESQGKAKDAIQQANSNIELAGQDLEKI 1632
Fly 1633 DE---ETYSAEAPANNTAQQVEKLAKKVQKLQNNIMKNDRDAKEITKEAGSVKLEAMRAR----- 1689
Fly 1690 --GEANNLQSATSATNQTLT---DRASRSENARERAKQLL---QRASKLTVDTNAKLKDLNDLQT 1746
Fly 1747 VYLNKNQQLLRLQAEIGPLNKELNEHLIHIKERGSHYRQC 1786 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB1 | NP_476618.1 | Laminin_N | 63..286 | CDD:278484 | 73/229 (32%) |
EGF_Lam | 287..343 | CDD:238012 | 24/60 (40%) | ||
Laminin_EGF | 355..415 | CDD:278482 | 26/59 (44%) | ||
Laminin_EGF | 418..475 | CDD:278482 | 8/56 (14%) | ||
EGF_Lam | 477..526 | CDD:238012 | 11/48 (23%) | ||
EGF_Lam | 529..567 | CDD:214543 | 0/37 (0%) | ||
EGF_Lam | 789..834 | CDD:214543 | 1/44 (2%) | ||
Laminin_EGF | 837..885 | CDD:278482 | 4/47 (9%) | ||
Laminin_EGF | 883..930 | CDD:278482 | 0/46 (0%) | ||
Laminin_EGF | 933..988 | CDD:278482 | 0/54 (0%) | ||
Laminin_EGF | 991..1043 | CDD:278482 | 2/51 (4%) | ||
Laminin_EGF | 1043..1091 | CDD:278482 | 21/47 (45%) | ||
Laminin_EGF | 1094..1142 | CDD:278482 | 22/52 (42%) | ||
Laminin_EGF | 1142..1190 | CDD:278482 | 17/47 (36%) | ||
COG6 | 1212..>1398 | CDD:303003 | 48/191 (25%) | ||
TelA | 1439..1782 | CDD:226371 | 79/365 (22%) | ||
ApoLp-III_like | 1545..1702 | CDD:304399 | 40/166 (24%) | ||
Lamb3 | NP_001264857.1 | Laminin_N | 20..248 | CDD:383136 | 81/243 (33%) |
EGF_Lam | 249..301 | CDD:238012 | 24/60 (40%) | ||
EGF_Lam | 312..362 | CDD:238012 | 25/49 (51%) | ||
Laminin_EGF | 376..425 | CDD:365839 | 24/415 (6%) | ||
EGF_Lam | 427..476 | CDD:238012 | 29/255 (11%) | ||
EGF_Lam | 478..528 | CDD:214543 | 21/49 (43%) | ||
EGF_Lam | 530..579 | CDD:238012 | 17/48 (35%) | ||
Domain II | 576..781 | 56/221 (25%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 723..760 | 6/40 (15%) | |||
Domain alpha | 782..812 | 9/29 (31%) | |||
Domain I | 813..1168 | 87/386 (23%) | |||
SMC_prok_B | <830..1161 | CDD:274008 | 77/358 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0994 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |